C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 496
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294753 ZNF496-001 ENSG00000162714 9606 - 1:247297412-247331743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyOvaryPlacentaTestisENST00000294753
Transcript ID Adrenal Breast Heart Kidney Ovary Placenta Testis
ENST00000294753 1.521±0.00 0.638±0.00 1.121±0.00 1.137±0.88 1.964±0.31 1.257±0.51 2.978±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TS CIL_0006TS_0001 CGP 1:247297412-247449108

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0003677 ISS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 ISS:IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0016604 IEA nuclear body
GO:0043621 IEA protein self-association
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000013262 Zkscan17-001 protein_coding Mus_musculus 0 1483
ENSMUST00000101150 Zkscan17-002 protein_coding Mus_musculus 0 856
ENSMUST00000134522 Zkscan17-004 processed_transcript Mus_musculus 0 573
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 7e-36 158
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 3e-34 152
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 3e-34 152
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 3e-34 152
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 3e-34 152
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 2e-32 147
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 7e-26 124
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 3e-24 119
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 3e-24 119
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 1e-18 100
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 1e-18 100
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 1e-18 100
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 4e-18 99
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 4e-18 99
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 4e-18 99

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