C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006TS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162714-ENSG00000162711 CGP 9606 1:247297412-247449108
GeneTranscriptPositionBiotype
ENSG00000162711 (NLRP3)
NLR family, pyrin domain containing 3
ENST00000336119 (NLRP3-001) 247418049-247448817 protein_coding
ENST00000348069 (NLRP3-002) 247418049-247448817 protein_coding
ENST00000366496 (NLRP3-007) 247418052-247448817 protein_coding
ENST00000366497 (NLRP3-201) 247416156-247449102 protein_coding
ENST00000391827 (NLRP3-004) 247418795-247448504 protein_coding
ENST00000391828 (NLRP3-003) 247416156-247449108 protein_coding
ENST00000474792 (NLRP3-005) 247418620-247425792 processed_transcript
ENST00000532083 (NLRP3-006) 247443907-247448576 processed_transcript
ENSG00000162714 (ZNF496)
zinc finger protein 496
ENST00000294753 (ZNF496-001) 247297412-247331743 protein_coding
ENST00000461277 (ZNF496-002) 247298201-247329245 protein_coding
ENST00000462139 (ZNF496-004) 247297412-247313852 processed_transcript
ENST00000477903 (ZNF496-006) 247328728-247331845 processed_transcript
ENST00000478225 (ZNF496-005) 247328676-247331846 processed_transcript
CIL_0006TS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020472-ENSMUSG00000032691 CGP 10090 11:59485520-59566956
GeneTranscriptPositionBiotype
ENSMUSG00000020472 (Zkscan17)
zinc finger with KRAB and SCAN domains 17
ENSMUST00000013262 (Zkscan17-001) 59485520-59506644 protein_coding
ENSMUST00000101150 (Zkscan17-002) 59485520-59506644 protein_coding
ENSMUST00000129941 (Zkscan17-005) 59504173-59506220 processed_transcript
ENSMUST00000134522 (Zkscan17-004) 59499544-59506220 processed_transcript
ENSMUST00000139093 (Zkscan17-003) 59504167-59526631 processed_transcript
ENSMUST00000139707 (Zkscan17-006) 59525452-59526751 processed_transcript
ENSMUSG00000032691 (Nlrp3)
NLR family, pyrin domain containing 3
ENSMUST00000079476 (Nlrp3-001) 59541568-59566955 protein_coding
ENSMUST00000101148 (Nlrp3-201) 59542686-59566956 protein_coding
ENSMUST00000149126 (Nlrp3-002) 59542756-59548118 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TS_0001ENSG00000162711ENST00000336119ENST00000348069ENST00000366496ENST00000366497ENST00000391827ENST00000391828ENST00000474792ENST00000532083ENSG00000162714ENST00000294753ENST00000461277ENST00000462139ENST00000477903ENST00000478225CIL_0006TS_0002ENSMUSG00000020472ENSMUST00000013262ENSMUST00000101150ENSMUST00000129941ENSMUST00000134522ENSMUST00000139093ENSMUST00000139707ENSMUSG00000032691ENSMUST00000079476ENSMUST00000101148ENSMUST00000149126
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TS_0001ENSG00000162711ENST00000336119ENST00000348069ENST00000366497ENST00000391827ENST00000391828ENST00000474792ENST00000532083ENSG00000162714ENST00000294753ENST00000461277ENST00000462139CIL_0006TS_0002ENSMUSG00000020472ENSMUST00000013262ENSMUST00000101150ENSMUST00000134522ENSMUSG00000032691ENSMUST00000079476ENSMUST00000101148
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162711 ENST00000336119 1.253±0.00 0.305±0.00 N/A N/A 0.440±0.00 N/A 0.203±0.00 0.154±0.00 N/A 0.969±0.00 N/A 0.152±0.10 0.368±0.03 N/A
ENST00000348069 N/A N/A N/A 0.555±0.00 N/A N/A N/A N/A 0.280±0.18 0.470±0.02 0.178±0.00 N/A N/A 0.094±0.00
ENST00000366496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366497 N/A 0.154±0.00 N/A 0.166±0.00 N/A N/A N/A N/A N/A 0.307±0.00 N/A 0.175±0.00 N/A N/A
ENST00000391827 0.400±0.00 N/A N/A N/A N/A 0.036±0.00 N/A 0.231±0.00 N/A N/A N/A 0.141±0.09 N/A N/A
ENST00000391828 0.363±0.00 0.339±0.00 N/A 0.300±0.00 0.470±0.15 0.231±0.00 0.135±0.00 0.260±0.00 N/A 0.515±0.00 N/A 0.342±0.09 0.635±0.18 0.146±0.04
ENST00000474792 N/A N/A 0.110±0.00 N/A 0.746±0.00 N/A N/A N/A N/A N/A 0.020±0.00 0.443±0.00 N/A N/A
ENST00000532083 N/A 1.198±0.00 N/A 1.425±0.00 N/A N/A N/A N/A N/A 3.055±0.00 N/A 0.254±0.00 1.455±0.28 0.426±0.13
ENSG00000162714 ENST00000294753 N/A 1.521±0.00 N/A N/A 0.638±0.00 N/A 1.121±0.00 1.137±0.88 N/A N/A N/A 1.964±0.31 1.257±0.51 2.978±0.42
ENST00000461277 5.111±0.00 3.856±0.00 0.745±0.00 1.568±0.13 1.429±0.79 1.788±0.94 2.362±0.00 2.919±0.00 0.587±0.22 4.896±0.00 2.608±1.58 3.780±2.50 4.202±0.71 7.789±0.98
ENST00000462139 N/A N/A N/A 0.164±0.00 N/A 0.407±0.00 0.138±0.00 0.067±0.00 0.279±0.22 0.427±0.14 N/A 0.519±0.18 N/A 1.225±0.00
ENST00000477903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020472 ENSMUST00000013262 3.416±1.76 3.287±0.95 5.807±1.15 5.262±1.24 2.012±0.70 3.349±0.99 2.081±0.25 3.188±1.41 2.074±0.57 4.525±1.38 3.076±0.78 5.626±2.58 6.407±2.59 15.612±7.75
ENSMUST00000101150 N/A 1.557±0.00 N/A N/A 3.150±1.25 N/A 1.789±0.21 1.682±0.11 1.036±0.32 N/A 2.013±0.78 11.672±0.00 5.611±0.14 8.252±1.57
ENSMUST00000129941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.896±0.00 21.651±3.48 46.082±0.00
ENSMUST00000139093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032691 ENSMUST00000079476 0.215±0.07 0.191±0.06 0.113±0.03 0.130±0.04 0.350±0.01 0.149±0.05 0.125±0.03 0.169±0.04 0.226±0.11 0.490±0.05 0.014±0.00 0.443±0.09 0.097±0.03 0.036±0.02
ENSMUST00000101148 N/A N/A 0.124±0.06 N/A 0.316±0.19 N/A N/A 0.190±0.00 0.285±0.12 0.616±0.29 0.033±0.00 0.431±0.11 0.081±0.06 N/A
ENSMUST00000149126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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