C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 496
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461277 ZNF496-002 ENSG00000162714 9606 - 1:247298201-247329245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000461277
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000461277 5.111±0.00 3.856±0.00 0.745±0.00 1.568±0.13 1.429±0.79 1.788±0.94 2.362±0.00 2.919±0.00 0.587±0.22 4.896±0.00 2.608±1.58 3.780±2.50 4.202±0.71 7.789±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TS CIL_0006TS_0001 CGP 1:247297412-247449108

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0003677 ISS DNA binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 ISS nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101150 Zkscan17-002 protein_coding Mus_musculus 0 809
ENSMUST00000013262 Zkscan17-001 protein_coding Mus_musculus 0 809
ENSMUST00000134522 Zkscan17-004 processed_transcript Mus_musculus 2e-30 139

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