C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 149
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163162 RNF149 9606 - 2:101271219-101308701 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295317 RNF149-001 101276091-101308696 protein_coding
  ENST00000424632 RNF149-002 101271222-101308701 nonsense_mediated_decay
  ENST00000463726 RNF149-004 101281859-101286503 retained_intron
  ENST00000478404 RNF149-003 101288708-101294662 retained_intron
  ENST00000485752 RNF149-006 101271219-101272936 processed_transcript
  ENST00000490553 RNF149-005 101281493-101286107 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295317ENST00000424632ENST00000478404ENST00000485752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295317 16.883±0.00 13.324±0.00 2.887±0.00 3.597±0.62 8.831±1.10 8.331±0.14 2.847±2.24 6.212±2.68 5.250±0.27 12.312±0.31 1.574±0.37 14.878±4.34 13.051±2.53 12.687±5.67
ENST00000424632 N/A N/A N/A 2.206±0.00 N/A 2.544±0.00 2.047±0.00 4.235±0.00 2.146±0.00 6.223±0.00 1.589±0.68 N/A N/A 4.892±0.00
ENST00000478404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A
ENST00000485752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.548±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0001 VISTA 2:100809636-101413030
CIL_0004HD CIL_0004HD_0001 CGP 2:101252802-101308701
CIL_0004HE CIL_0004HE_0001 CGP 2:101271219-101387595

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031647 IEA regulation of protein stability
GO:0035690 IEA cellular response to drug
GO:0043409 IEA negative regulation of MAPK cascade
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000048234 Rnf149 ring finger protein 149 protein_coding Mus_musculus

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