C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 149
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295317 RNF149-001 ENSG00000163162 9606 - 2:101276091-101308696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295317 16.883±0.00 13.324±0.00 2.887±0.00 3.597±0.62 8.831±1.10 8.331±0.14 2.847±2.24 6.212±2.68 5.250±0.27 12.312±0.31 1.574±0.37 14.878±4.34 13.051±2.53 12.687±5.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0001 VISTA 2:100809636-101413030
CIL_0004HD CIL_0004HD_0001 CGP 2:101252802-101308701
CIL_0004HE CIL_0004HE_0001 CGP 2:101271219-101387595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031647 IEA regulation of protein stability
GO:0035690 IEA cellular response to drug
GO:0043409 IEA negative regulation of MAPK cascade
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062525 Rnf149-001 protein_coding Mus_musculus 0 1123
ENSMUST00000153381 Rnf149-002 processed_transcript Mus_musculus 4.2039e-45 187

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