C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163162-ENSG00000175874 CGP 9606 2:101271219-101387595
GeneTranscriptPositionBiotype
ENSG00000163162 (RNF149)
ring finger protein 149 		ENST00000295317 (RNF149-001) 101276091-101308696 protein_coding
ENST00000424632 (RNF149-002) 101271222-101308701 nonsense_mediated_decay
ENST00000463726 (RNF149-004) 101281859-101286503 retained_intron
ENST00000478404 (RNF149-003) 101288708-101294662 retained_intron
ENST00000485752 (RNF149-006) 101271219-101272936 processed_transcript
ENST00000490553 (RNF149-005) 101281493-101286107 retained_intron
ENSG00000175874 (CREG2)
cellular repressor of E1A-stimulated genes 2 		ENST00000324768 (CREG2-001) 101345551-101387595 protein_coding
ENST00000486966 (CREG2-003) 101382926-101387466 processed_transcript
ENST00000495455 (CREG2-002) 101382079-101387140 processed_transcript
ENSG00000226058 (AC092570.1)
 ENST00000414446 (AC092570.1-001) 101375587-101376055 processed_pseudogene
CIL_0004HE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048234-ENSMUSG00000050967 CGP 10090 1:39551296-39651182
GeneTranscriptPositionBiotype
ENSMUSG00000048234 (Rnf149)
ring finger protein 149 		ENSMUST00000062525 (Rnf149-001) 39551296-39577405 protein_coding
ENSMUST00000153381 (Rnf149-002) 39555605-39558757 processed_transcript
ENSMUSG00000050967 (Creg2)
cellular repressor of E1A-stimulated genes 2 		ENSMUST00000053355 (Creg2-201) 39618406-39651182 protein_coding
ENSMUSG00000064936 (Gm23722)
predicted gene, 23722 		ENSMUST00000083002 (Gm23722-201) 39573746-39573875 snoRNA
ENSMUSG00000097083 (D930019O06Rik)
RIKEN cDNA D930019O06 		ENSMUST00000181841 (D930019O06Rik-201) 39650176-39657390 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HE_0001ENSG00000163162ENST00000295317ENST00000424632ENST00000463726ENST00000478404ENST00000485752ENST00000490553ENSG00000175874ENST00000324768ENST00000486966ENST00000495455ENSG00000226058ENST00000414446CIL_0004HE_0002ENSMUSG00000048234ENSMUST00000062525ENSMUST00000153381ENSMUSG00000050967ENSMUST00000053355ENSMUSG00000064936ENSMUST00000083002ENSMUSG00000097083ENSMUST00000181841
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HE_0001ENSG00000163162ENST00000295317ENST00000424632ENST00000478404ENST00000485752ENSG00000175874ENST00000324768ENST00000486966ENST00000495455ENSG00000226058ENST00000414446CIL_0004HE_0002ENSMUSG00000048234ENSMUST00000062525ENSMUSG00000050967ENSMUST00000053355ENSMUSG00000064936ENSMUST00000083002ENSMUSG00000097083ENSMUST00000181841
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163162 ENST00000295317 16.883±0.00 13.324±0.00 2.887±0.00 3.597±0.62 8.831±1.10 8.331±0.14 2.847±2.24 6.212±2.68 5.250±0.27 12.312±0.31 1.574±0.37 14.878±4.34 13.051±2.53 12.687±5.67
ENST00000424632 N/A N/A N/A 2.206±0.00 N/A 2.544±0.00 2.047±0.00 4.235±0.00 2.146±0.00 6.223±0.00 1.589±0.68 N/A N/A 4.892±0.00
ENST00000463726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A
ENST00000485752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.548±0.00 N/A N/A N/A
ENST00000490553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175874 ENST00000324768 0.008±0.00 0.020±0.00 0.020±0.00 18.687±5.65 0.046±0.03 0.019±0.00 0.007±0.00 0.043±0.00 0.106±0.00 0.015±0.00 0.049±0.04 0.364±0.31 0.010±0.00 0.045±0.01
ENST00000486966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A
ENST00000495455 0.485±0.00 1.138±0.00 N/A N/A 0.563±0.00 0.368±0.00 0.536±0.00 0.765±0.00 0.129±0.00 0.114±0.00 0.032±0.00 0.182±0.00 0.255±0.09 0.479±0.06
ENSG00000226058 ENST00000414446 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048234 ENSMUST00000062525 13.459±6.72 47.959±20.75 10.705±1.03 9.198±1.55 8.906±5.21 25.734±12.55 1.690±0.33 22.244±4.04 31.035±14.22 15.066±1.18 1.786±0.15 30.319±10.08 12.635±6.74 5.068±1.33
ENSMUST00000153381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050967 ENSMUST00000053355 0.058±0.04 0.033±0.02 0.032±0.00 4.611±5.03 0.189±0.07 0.070±0.05 0.022±0.00 0.035±0.02 0.006±0.00 0.049±0.02 0.014±0.01 0.225±0.09 0.009±0.01 0.067±0.01
ENSMUSG00000064936 ENSMUST00000083002 N/A N/A N/A N/A N/A N/A N/A N/A 6.769±0.00 N/A N/A 7.730±0.00 19.056±9.36 N/A
ENSMUSG00000097083 ENSMUST00000181841 0.156±0.14 0.096±0.07 0.016±0.00 0.319±0.00 0.469±0.24 0.126±0.06 0.008±0.00 0.025±0.01 0.012±0.01 0.101±0.06 0.018±0.01 1.213±0.33 0.052±0.03 0.073±0.03

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