C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 149
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424632 RNF149-002 ENSG00000163162 9606 - 2:101271222-101308701 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleTestisENST00000424632
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Testis
ENST00000424632 2.206±0.00 2.544±0.00 2.047±0.00 4.235±0.00 2.146±0.00 6.223±0.00 1.589±0.68 4.892±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0001 VISTA 2:100809636-101413030
CIL_0004HD CIL_0004HD_0001 CGP 2:101252802-101308701
CIL_0004HE CIL_0004HE_0001 CGP 2:101271219-101387595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062525 Rnf149-001 protein_coding Mus_musculus 0 983
ENSMUST00000153381 Rnf149-002 processed_transcript Mus_musculus 2.8026e-45 187

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