C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S18C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163319 MRPS18C 9606 + 4:83455932-83469735 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295491 MRPS18C-001 83455965-83462298 protein_coding
  ENST00000505525 MRPS18C-007 83459620-83461236 retained_intron
  ENST00000505719 MRPS18C-005 83456090-83461328 protein_coding
  ENST00000507019 MRPS18C-003 83455983-83461423 protein_coding
  ENST00000507349 MRPS18C-006 83456055-83461237 protein_coding
  ENST00000509571 MRPS18C-009 83461193-83469735 processed_transcript
  ENST00000509970 MRPS18C-010 83456083-83467504 protein_coding
  ENST00000512375 MRPS18C-002 83455932-83459144 retained_intron
  ENST00000514581 MRPS18C-004 83459672-83461235 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000295491ENST00000505719ENST00000507019ENST00000512375
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000295491 1.923±0.00 N/A N/A N/A 2.825±0.00 2.395±0.00 2.284±0.00 N/A N/A N/A
ENST00000505719 N/A N/A N/A 6.305±0.00 N/A 5.018±0.00 N/A N/A N/A N/A
ENST00000507019 N/A N/A 3.456±0.00 N/A 1.938±0.00 N/A N/A 2.603±0.00 5.618±0.00 5.464±0.31
ENST00000512375 N/A 1.428±0.00 N/A N/A N/A N/A 0.983±0.00 N/A 0.913±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JA CIL_0006JA_0001 CGP 4:83407343-83469735
CIL_0006J9 CIL_0006J9_0001 CGP 4:83455932-83523348

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005763 IDA mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 NAS:IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069624 mrps18c mitochondrial ribosomal protein S18C protein_coding Danio_rerio
ENSMUSG00000016833 Mrps18c mitochondrial ribosomal protein S18C protein_coding Mus_musculus

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