C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mitochondrial ribosomal protein S18C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295491 MRPS18C-001 ENSG00000163319 9606 + 4:83455965-83462298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverLungENST00000295491
Transcript ID Bladder Kidney Liver Lung
ENST00000295491 1.923±0.00 2.825±0.00 2.395±0.00 2.284±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JA CIL_0006JA_0001 CGP 4:83407343-83469735
CIL_0006J9 CIL_0006J9_0001 CGP 4:83455932-83523348

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005763 IDA mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 NAS:IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016977 Mrps18c-001 protein_coding Mus_musculus 0 425
ENSMUST00000160654 Gm15946-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000122080 Gm14237-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000143477 Mrps18c-005 retained_intron Mus_musculus 0 200
ENSMUST00000112898 Mrps18c-004 protein_coding Mus_musculus 0 198
ENSMUST00000112901 Mrps18c-002 protein_coding Mus_musculus 2e-27 128

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