C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S18C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507019 MRPS18C-003 ENSG00000163319 9606 + 4:83455983-83461423 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleOvaryPlacentaENST00000507019
Transcript ID Colon Kidney Muscle Ovary Placenta
ENST00000507019 3.456±0.00 1.938±0.00 2.603±0.00 5.618±0.00 5.464±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JA CIL_0006JA_0001 CGP 4:83407343-83469735
CIL_0006J9 CIL_0006J9_0001 CGP 4:83455932-83523348

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016977 Mrps18c-001 protein_coding Mus_musculus 0 285
ENSMUST00000160654 Gm15946-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000122080 Gm14237-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000143477 Mrps18c-005 retained_intron Mus_musculus 0 200
ENSMUST00000112898 Mrps18c-004 protein_coding Mus_musculus 0 198
ENSMUST00000112901 Mrps18c-002 protein_coding Mus_musculus 7e-28 128

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