C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S18C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016833 Mrps18c 10090 + 5:100798627-100804471 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016977 Mrps18c-001 100798627-100804471 protein_coding
  ENSMUST00000112898 Mrps18c-004 100798737-100804461 protein_coding
  ENSMUST00000112901 Mrps18c-002 100798747-100804471 protein_coding
  ENSMUST00000140296 Mrps18c-003 100798743-100799689 retained_intron
  ENSMUST00000143477 Mrps18c-005 100803910-100804469 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016977ENSMUST00000112898ENSMUST00000112901ENSMUST00000140296ENSMUST00000143477
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016977 7.103±1.00 3.093±1.43 23.579±1.34 22.893±9.20 6.530±0.93 3.253±1.63 10.392±1.62 9.470±4.27 24.073±22.27 5.989±1.62 30.419±2.00 17.192±17.53 34.416±13.40 11.062±3.38
ENSMUST00000112898 4.188±0.00 7.157±3.38 N/A N/A N/A 8.934±2.88 7.031±3.03 15.776±2.61 22.621±2.70 5.521±1.54 N/A 3.025±1.38 N/A 8.027±3.27
ENSMUST00000112901 1.104±0.29 2.449±1.26 N/A N/A 7.661±0.00 2.400±0.43 N/A N/A N/A N/A N/A 2.005±1.18 N/A N/A
ENSMUST00000140296 N/A N/A N/A 15.912±0.00 5.182±0.00 19.285±0.83 N/A 58.663±0.00 40.158±3.43 N/A N/A 15.249±6.74 N/A N/A
ENSMUST00000143477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.714±4.01 47.144±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000820 CIL_000820_0002 VISTA 5:100731954-101333223
CIL_0006JA CIL_0006JA_0002 CGP 5:100762145-100804471
CIL_0006J9 CIL_0006J9_0002 CGP 5:100798627-100820965

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 IEA mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069624 mrps18c mitochondrial ribosomal protein S18C protein_coding Danio_rerio
ENSG00000163319 MRPS18C mitochondrial ribosomal protein S18C protein_coding Homo_sapiens

Loading