C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 4, regulatory subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163605 PPP4R2 9606 + 3:72996785-73069199 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356692 PPP4R2-001 72996785-73069199 protein_coding
  ENST00000460360 PPP4R2-006 73064014-73065290 protein_coding
  ENST00000470976 PPP4R2-004 72996818-73061454 retained_intron
  ENST00000476505 PPP4R2-002 72997358-73059051 protein_coding
  ENST00000482242 PPP4R2-003 72996803-73064982 nonsense_mediated_decay
  ENST00000488810 PPP4R2-005 72996839-73064966 protein_coding
  ENST00000495566 PPP4R2-007 72996977-73016134 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356692
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356692 7.485±0.00 6.890±0.00 7.084±1.49 6.334±1.27 5.740±0.58 6.094±2.85 7.618±0.61 5.144±1.88 6.162±0.99 4.207±2.97 7.479±0.55 4.770±1.39 12.025±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059P CIL_00059P_0002 CGP 3:72749277-72998138
CIL_00059V CIL_00059V_0002 CGP 3:72888073-73069199

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 TAS centrosome
GO:0006397 IEA mRNA processing
GO:0006464 TAS cellular protein modification process
GO:0008380 IEA RNA splicing
GO:0010569 IMP regulation of double-strand break repair via homologous recombination
GO:0030289 IDA protein phosphatase 4 complex
GO:0030362 IMP protein phosphatase type 4 regulator activity
GO:0030674 IMP protein binding, bridging
GO:0050790 IMP regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026540 ppp4r2a protein phosphatase 4, regulatory subunit 2a protein_coding Danio_rerio
ENSDARG00000053447 ppp4r2b protein phosphatase 4, regulatory subunit 2b protein_coding Danio_rerio
ENSMUSG00000052144 Ppp4r2 protein phosphatase 4, regulatory subunit 2 protein_coding Mus_musculus

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