C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00059V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044191-ENSDARG00000053447 CGP 7955 6:44095027-44138971
GeneTranscriptPositionBiotype
ENSDARG00000044191 (gxylt2)
glucoside xylosyltransferase 2 		ENSDART00000064878 (gxylt2-001) 44095027-44125040 protein_coding
ENSDARG00000053447 (ppp4r2b)
protein phosphatase 4, regulatory subunit 2b 		ENSDART00000075486 (ppp4r2b-001) 44128648-44138971 protein_coding
ENSDART00000124168 (ppp4r2b-201) 44128652-44138967 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00059V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172986-ENSG00000163605 CGP 9606 3:72888073-73069199
GeneTranscriptPositionBiotype
ENSG00000163605 (PPP4R2)
protein phosphatase 4, regulatory subunit 2 		ENST00000356692 (PPP4R2-001) 72996785-73069199 protein_coding
ENST00000460360 (PPP4R2-006) 73064014-73065290 protein_coding
ENST00000470976 (PPP4R2-004) 72996818-73061454 retained_intron
ENST00000476505 (PPP4R2-002) 72997358-73059051 protein_coding
ENST00000482242 (PPP4R2-003) 72996803-73064982 nonsense_mediated_decay
ENST00000488810 (PPP4R2-005) 72996839-73064966 protein_coding
ENST00000495566 (PPP4R2-007) 72996977-73016134 protein_coding
ENSG00000172986 (GXYLT2)
glucoside xylosyltransferase 2 		ENST00000389617 (GXYLT2-001) 72888073-72976926 protein_coding
ENST00000491839 (GXYLT2-003) 72955215-72998138 protein_coding
ENST00000498315 (GXYLT2-002) 72908022-72955181 protein_coding
ENSG00000242960 (FTH1P23)
ferritin, heavy polypeptide 1 pseudogene 23 		ENST00000492727 (FTH1P23-001) 72929044-72929593 processed_pseudogene
ENSG00000255423 (EBLN2)
endogenous Bornavirus-like nucleoprotein 2 		ENST00000533473 (EBLN2-001) 73061659-73063337 protein_coding
ENSG00000276890 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000614846 (Metazoa_SRP.1-396) 72926955-72927237 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_00059V_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030074-ENSMUSG00000052144 CGP 10090 6:100704734-100868717
GeneTranscriptPositionBiotype
ENSMUSG00000030074 (Gxylt2)
glucoside xylosyltransferase 2 		ENSMUST00000032157 (Gxylt2-001) 100704734-100805081 protein_coding
ENSMUST00000141333 (Gxylt2-002) 100704755-100707674 processed_transcript
ENSMUSG00000052144 (Ppp4r2)
protein phosphatase 4, regulatory subunit 2 		ENSMUST00000063854 (Ppp4r2-201) 100833638-100868717 protein_coding
ENSMUSG00000084157 (Gm15576)
predicted gene 15576 		ENSMUST00000117806 (Gm15576-001) 100726234-100726760 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059V_0001ENSDARG00000044191ENSDART00000064878ENSDARG00000053447ENSDART00000075486ENSDART00000124168CIL_00059V_0002ENSG00000163605ENST00000356692ENST00000460360ENST00000470976ENST00000476505ENST00000482242ENST00000488810ENST00000495566ENSG00000172986ENST00000389617ENST00000491839ENST00000498315ENSG00000242960ENST00000492727ENSG00000255423ENST00000533473ENSG00000276890ENST00000614846CIL_00059V_0003ENSMUSG00000030074ENSMUST00000032157ENSMUST00000141333ENSMUSG00000052144ENSMUST00000063854ENSMUSG00000084157ENSMUST00000117806
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059V_0001ENSDARG00000044191ENSDART00000064878ENSDARG00000053447ENSDART00000075486ENSDART00000124168CIL_00059V_0002ENSG00000163605ENST00000356692ENSG00000172986ENST00000389617ENSG00000242960ENST00000492727ENSG00000255423ENST00000533473ENSG00000276890ENST00000614846CIL_00059V_0003ENSMUSG00000030074ENSMUST00000032157ENSMUST00000141333ENSMUSG00000052144ENSMUST00000063854ENSMUSG00000084157ENSMUST00000117806
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044191 ENSDART00000064878 N/A N/A N/A 2.812±0.00 N/A N/A 1.432±0.99 N/A 0.231±0.00 N/A 0.738±0.00 N/A N/A N/A
ENSDARG00000053447 ENSDART00000075486 N/A N/A N/A 8.309±1.41 N/A N/A 9.602±0.18 12.298±0.00 1.437±0.00 N/A 4.512±0.00 N/A N/A N/A
ENSDART00000124168 N/A N/A N/A 4.758±0.04 N/A N/A 2.836±1.57 11.076±0.20 0.207±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163605 ENST00000356692 7.485±0.00 6.890±0.00 N/A 7.084±1.49 6.334±1.27 5.740±0.58 6.094±2.85 7.618±0.61 5.144±1.88 6.162±0.99 4.207±2.97 7.479±0.55 4.770±1.39 12.025±0.83
ENST00000460360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172986 ENST00000389617 N/A N/A N/A N/A 3.567±1.18 3.941±0.00 3.547±0.00 N/A N/A 2.704±0.00 N/A N/A N/A N/A
ENST00000491839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242960 ENST00000492727 0.986±0.00 0.340±0.00 N/A 0.302±0.22 1.031±0.15 0.330±0.08 0.196±0.00 0.800±0.00 0.661±0.55 0.615±0.56 0.302±0.21 0.126±0.08 0.178±0.09 0.335±0.06
ENSG00000255423 ENST00000533473 0.474±0.00 0.790±0.00 0.777±0.00 0.364±0.09 1.010±0.63 0.845±0.59 0.419±0.09 0.557±0.31 0.571±0.50 1.579±1.10 0.254±0.00 1.053±0.71 0.181±0.09 0.548±0.41
ENSG00000276890 ENST00000614846 0.414±0.00 1.780±0.00 N/A 0.764±0.00 0.963±0.00 N/A N/A 0.252±0.00 N/A 0.353±0.00 0.056±0.00 1.684±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030074 ENSMUST00000032157 3.472±2.54 0.862±0.34 N/A 0.237±0.14 2.180±1.50 0.556±0.24 0.747±0.42 0.561±0.06 0.040±0.03 1.001±0.38 0.177±0.07 12.130±5.26 0.234±0.18 1.673±0.43
ENSMUST00000141333 N/A N/A N/A 0.222±0.00 0.978±0.45 N/A 0.265±0.00 0.118±0.01 0.032±0.00 0.193±0.01 0.076±0.02 1.984±0.00 N/A N/A
ENSMUSG00000052144 ENSMUST00000063854 3.310±1.08 3.579±0.67 7.236±0.94 8.365±4.03 3.046±1.64 1.700±1.51 1.951±0.30 1.699±0.37 6.008±4.35 2.466±0.69 8.121±0.68 7.290±2.59 16.018±2.36 6.208±2.01
ENSMUSG00000084157 ENSMUST00000117806 N/A N/A 0.115±0.00 0.039±0.00 0.276±0.00 N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A

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