C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sideroflexin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164466 SFXN1 9606 + 5:175477062-175529742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321442 SFXN1-001 175478395-175529742 protein_coding
  ENST00000421887 SFXN1-011 175521886-175526883 retained_intron
  ENST00000502393 SFXN1-010 175478575-175511579 protein_coding
  ENST00000502865 SFXN1-007 175492207-175516662 nonsense_mediated_decay
  ENST00000506963 SFXN1-004 175478592-175512181 protein_coding
  ENST00000507017 SFXN1-012 175477062-175510207 protein_coding
  ENST00000507395 SFXN1-006 175478565-175492546 retained_intron
  ENST00000507823 SFXN1-002 175478590-175524103 nonsense_mediated_decay
  ENST00000508290 SFXN1-008 175478564-175509403 retained_intron
  ENST00000513725 SFXN1-009 175478591-175510312 retained_intron
  ENST00000515736 SFXN1-014 175511436-175513738 retained_intron
  ENST00000515791 SFXN1-005 175478566-175491988 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321442ENST00000502393ENST00000502865ENST00000506963ENST00000507823
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321442 1.096±0.00 4.396±0.00 1.356±0.00 7.160±4.47 2.475±0.00 1.860±1.08 1.827±1.08 9.175±2.20 6.549±6.01 0.769±0.03 0.185±0.00 3.997±1.71 5.103±0.45 2.934±0.79
ENST00000502393 N/A N/A 5.826±0.00 16.318±0.00 2.637±0.00 3.822±0.00 3.862±0.00 21.727±0.00 3.066±0.00 N/A N/A 4.010±0.00 N/A N/A
ENST00000502865 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.110±0.00 0.746±0.00 N/A N/A N/A
ENST00000506963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.530±0.00 N/A N/A N/A
ENST00000507823 N/A N/A N/A N/A N/A 1.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z0 CIL_0006Z0_0001 CGP 5:175440039-175529742
CIL_0006Z4 CIL_0006Z4_0001 CGP 5:175477062-175686242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0006826 IEA iron ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030218 IEA erythrocyte differentiation
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019963 sfxn1 sideroflexin 1 protein_coding Danio_rerio
ENSMUSG00000021474 Sfxn1 sideroflexin 1 protein_coding Mus_musculus

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