C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sideroflexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321442 SFXN1-001 ENSG00000164466 9606 + 5:175478395-175529742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321442 1.096±0.00 4.396±0.00 1.356±0.00 7.160±4.47 2.475±0.00 1.860±1.08 1.827±1.08 9.175±2.20 6.549±6.01 0.769±0.03 0.185±0.00 3.997±1.71 5.103±0.45 2.934±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z0 CIL_0006Z0_0001 CGP 5:175440039-175529742
CIL_0006Z4 CIL_0006Z4_0001 CGP 5:175477062-175686242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0006826 IEA iron ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030218 IEA erythrocyte differentiation
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021930 Sfxn1-201 protein_coding Mus_musculus 0 983
ENSDART00000023654 sfxn1-201 protein_coding Danio_rerio 0 527
ENSDART00000133811 sfxn1-001 protein_coding Danio_rerio 0 527
ENSMUST00000189136 Srcap-004 protein_coding Mus_musculus 0.00001 57

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