C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Z4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164466-ENSG00000113749 CGP 9606 5:175477062-175686242
GeneTranscriptPositionBiotype
ENSG00000113749 (HRH2)
histamine receptor H2 		ENST00000231683 (HRH2-002) 175683234-175684313 protein_coding
ENST00000377291 (HRH2-001) 175658030-175686242 protein_coding
ENSG00000164466 (SFXN1)
sideroflexin 1 		ENST00000321442 (SFXN1-001) 175478395-175529742 protein_coding
ENST00000421887 (SFXN1-011) 175521886-175526883 retained_intron
ENST00000502393 (SFXN1-010) 175478575-175511579 protein_coding
ENST00000502865 (SFXN1-007) 175492207-175516662 nonsense_mediated_decay
ENST00000506963 (SFXN1-004) 175478592-175512181 protein_coding
ENST00000507017 (SFXN1-012) 175477062-175510207 protein_coding
ENST00000507395 (SFXN1-006) 175478565-175492546 retained_intron
ENST00000507823 (SFXN1-002) 175478590-175524103 nonsense_mediated_decay
ENST00000508290 (SFXN1-008) 175478564-175509403 retained_intron
ENST00000513725 (SFXN1-009) 175478591-175510312 retained_intron
ENST00000515736 (SFXN1-014) 175511436-175513738 retained_intron
ENST00000515791 (SFXN1-005) 175478566-175491988 processed_transcript
ENSG00000270839 (CTC-571O20.1)
 ENST00000605088 (CTC-571O20.1-001) 175483595-175484192 processed_pseudogene
CIL_0006Z4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021474-ENSMUSG00000034987 CGP 10090 13:54071845-54222432
GeneTranscriptPositionBiotype
ENSMUSG00000021474 (Sfxn1)
sideroflexin 1 		ENSMUST00000021930 (Sfxn1-201) 54071845-54108346 protein_coding
ENSMUSG00000034987 (Hrh2)
histamine receptor H2 		ENSMUST00000038101 (Hrh2-001) 54192129-54222432 protein_coding
ENSMUSG00000090016 (Gm16578)
predicted gene 16578 		ENSMUST00000160797 (Gm16578-001) 54219453-54223023 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Z4_0001ENSG00000113749ENST00000231683ENST00000377291ENSG00000164466ENST00000321442ENST00000421887ENST00000502393ENST00000502865ENST00000506963ENST00000507017ENST00000507395ENST00000507823ENST00000508290ENST00000513725ENST00000515736ENST00000515791ENSG00000270839ENST00000605088CIL_0006Z4_0002ENSMUSG00000021474ENSMUST00000021930ENSMUSG00000034987ENSMUST00000038101ENSMUSG00000090016ENSMUST00000160797
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Z4_0001ENSG00000113749ENST00000231683ENST00000377291ENSG00000164466ENST00000321442ENST00000502393ENST00000502865ENST00000506963ENST00000507823ENSG00000270839ENST00000605088CIL_0006Z4_0002ENSMUSG00000021474ENSMUST00000021930ENSMUSG00000034987ENSMUST00000038101ENSMUSG00000090016ENSMUST00000160797
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113749 ENST00000231683 1.459±0.00 1.946±0.00 N/A 2.370±0.54 0.436±0.00 0.240±0.00 5.358±3.95 0.416±0.00 0.096±0.06 1.267±0.05 0.071±0.00 0.369±0.08 2.433±0.21 0.757±0.00
ENST00000377291 0.868±0.00 1.092±0.00 0.049±0.00 0.721±0.47 0.237±0.03 0.257±0.10 3.818±0.00 0.136±0.01 0.050±0.01 1.307±0.62 N/A 0.137±0.11 0.972±0.00 0.157±0.03
ENSG00000164466 ENST00000321442 1.096±0.00 4.396±0.00 1.356±0.00 7.160±4.47 2.475±0.00 1.860±1.08 1.827±1.08 9.175±2.20 6.549±6.01 0.769±0.03 0.185±0.00 3.997±1.71 5.103±0.45 2.934±0.79
ENST00000421887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502393 N/A N/A 5.826±0.00 16.318±0.00 2.637±0.00 3.822±0.00 3.862±0.00 21.727±0.00 3.066±0.00 N/A N/A 4.010±0.00 N/A N/A
ENST00000502865 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.110±0.00 0.746±0.00 N/A N/A N/A
ENST00000506963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.530±0.00 N/A N/A N/A
ENST00000507017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507823 N/A N/A N/A N/A N/A 1.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270839 ENST00000605088 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021474 ENSMUST00000021930 22.575±1.37 15.082±1.92 13.513±0.80 16.826±6.89 28.006±4.00 11.686±1.47 3.268±0.55 49.634±5.59 24.915±4.04 6.347±0.61 0.641±0.27 12.822±3.91 12.521±9.09 1.371±0.55
ENSMUSG00000034987 ENSMUST00000038101 0.600±0.18 0.299±0.13 0.051±0.00 0.138±0.01 1.129±0.42 0.165±0.07 0.245±0.04 0.178±0.02 0.083±0.04 0.519±0.02 0.078±0.04 0.149±0.07 0.061±0.04 0.290±0.20
ENSMUSG00000090016 ENSMUST00000160797 0.093±0.04 N/A 0.061±0.00 0.044±0.00 0.168±0.01 N/A N/A 0.055±0.00 0.055±0.05 0.061±0.00 N/A 0.064±0.00 0.008±0.00 0.692±0.39

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