C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sideroflexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507823 SFXN1-002 ENSG00000164466 9606 + 5:175478590-175524103 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000507823
Transcript ID Colon
ENST00000507823 1.134±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z0 CIL_0006Z0_0001 CGP 5:175440039-175529742
CIL_0006Z4 CIL_0006Z4_0001 CGP 5:175477062-175686242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006811 IEA ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000023654 sfxn1-201 protein_coding Danio_rerio 0 464
ENSDART00000133811 sfxn1-001 protein_coding Danio_rerio 0 464

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