C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Z0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184845-ENSG00000164466 CGP 9606 5:175440039-175529742
GeneTranscriptPositionBiotype
ENSG00000164466 (SFXN1)
sideroflexin 1 		ENST00000321442 (SFXN1-001) 175478395-175529742 protein_coding
ENST00000421887 (SFXN1-011) 175521886-175526883 retained_intron
ENST00000502393 (SFXN1-010) 175478575-175511579 protein_coding
ENST00000502865 (SFXN1-007) 175492207-175516662 nonsense_mediated_decay
ENST00000506963 (SFXN1-004) 175478592-175512181 protein_coding
ENST00000507017 (SFXN1-012) 175477062-175510207 protein_coding
ENST00000507395 (SFXN1-006) 175478565-175492546 retained_intron
ENST00000507823 (SFXN1-002) 175478590-175524103 nonsense_mediated_decay
ENST00000508290 (SFXN1-008) 175478564-175509403 retained_intron
ENST00000513725 (SFXN1-009) 175478591-175510312 retained_intron
ENST00000515736 (SFXN1-014) 175511436-175513738 retained_intron
ENST00000515791 (SFXN1-005) 175478566-175491988 processed_transcript
ENSG00000184845 (DRD1)
dopamine receptor D1 		ENST00000393752 (DRD1-001) 175440039-175444208 protein_coding
ENSG00000270839 (CTC-571O20.1)
 ENST00000605088 (CTC-571O20.1-001) 175483595-175484192 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006Z0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021478-ENSMUSG00000021474 CGP 10090 13:54051186-54108346
GeneTranscriptPositionBiotype
ENSMUSG00000021474 (Sfxn1)
sideroflexin 1 		ENSMUST00000021930 (Sfxn1-201) 54071845-54108346 protein_coding
ENSMUSG00000021478 (Drd1a)
dopamine receptor D1A 		ENSMUST00000021932 (Drd1a-201) 54051186-54055658 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Z0_0001ENSG00000164466ENST00000321442ENST00000421887ENST00000502393ENST00000502865ENST00000506963ENST00000507017ENST00000507395ENST00000507823ENST00000508290ENST00000513725ENST00000515736ENST00000515791ENSG00000184845ENST00000393752ENSG00000270839ENST00000605088CIL_0006Z0_0002ENSMUSG00000021474ENSMUST00000021930ENSMUSG00000021478ENSMUST00000021932
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Z0_0001ENSG00000164466ENST00000321442ENST00000502393ENST00000502865ENST00000506963ENST00000507823ENSG00000184845ENST00000393752ENSG00000270839ENST00000605088CIL_0006Z0_0002ENSMUSG00000021474ENSMUST00000021930ENSMUSG00000021478ENSMUST00000021932
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164466 ENST00000321442 1.096±0.00 4.396±0.00 1.356±0.00 7.160±4.47 2.475±0.00 1.860±1.08 1.827±1.08 9.175±2.20 6.549±6.01 0.769±0.03 0.185±0.00 3.997±1.71 5.103±0.45 2.934±0.79
ENST00000421887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502393 N/A N/A 5.826±0.00 16.318±0.00 2.637±0.00 3.822±0.00 3.862±0.00 21.727±0.00 3.066±0.00 N/A N/A 4.010±0.00 N/A N/A
ENST00000502865 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.110±0.00 0.746±0.00 N/A N/A N/A
ENST00000506963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.530±0.00 N/A N/A N/A
ENST00000507017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507823 N/A N/A N/A N/A N/A 1.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184845 ENST00000393752 0.035±0.00 0.218±0.00 0.043±0.00 0.871±0.36 0.546±0.00 0.147±0.11 N/A 0.102±0.01 0.105±0.07 0.453±0.32 N/A 0.265±0.15 0.239±0.15 0.085±0.08
ENSG00000270839 ENST00000605088 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021474 ENSMUST00000021930 22.575±1.37 15.082±1.92 13.513±0.80 16.826±6.89 28.006±4.00 11.686±1.47 3.268±0.55 49.634±5.59 24.915±4.04 6.347±0.61 0.641±0.27 12.822±3.91 12.521±9.09 1.371±0.55
ENSMUSG00000021478 ENSMUST00000021932 0.206±0.08 0.035±0.00 0.064±0.00 2.103±2.30 0.097±0.05 0.051±0.01 0.045±0.01 0.037±0.02 0.010±0.01 0.013±0.00 0.035±0.02 0.172±0.16 0.021±0.02 0.012±0.00

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