C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 13 (sodium/sulfate symporter), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164707 SLC13A4 9606 - 7:135681237-135729258 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354042 SLC13A4-001 135681237-135728186 protein_coding
  ENST00000378428 SLC13A4-007 135708141-135729226 protein_coding
  ENST00000422620 SLC13A4-008 135721393-135729258 protein_coding
  ENST00000471405 SLC13A4-002 135681241-135728204 retained_intron
  ENST00000478310 SLC13A4-003 135707437-135728174 retained_intron
  ENST00000480376 SLC13A4-004 135699364-135705807 retained_intron
  ENST00000491630 SLC13A4-006 135681237-135685685 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverPlacentaTestisENST00000354042ENST00000471405
Transcript ID Brain Breast Colon Liver Placenta Testis
ENST00000354042 3.929±2.41 N/A N/A N/A 45.335±35.58 4.063±0.00
ENST00000471405 N/A 0.163±0.00 0.228±0.00 0.349±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082N CIL_00082N_0001 VISTA 7:135472160-136074488
CIL_0002H3 CIL_0002H3_0001 CGP 7:135681237-135748846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006814 IEA sodium ion transport
GO:0008272 TAS sulfate transport
GO:0015382 TAS sodium:sulfate symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035725 TAS sodium ion transmembrane transport
GO:0055085 IEA:TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059053 slc13a4 solute carrier family 13 (sodium/sulfate symporter), member 4 protein_coding Danio_rerio
ENSMUSG00000029843 Slc13a4 solute carrier family 13 (sodium/sulfate symporters), member 4 protein_coding Mus_musculus

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