C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 13 (sodium/sulfate symporter), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354042 SLC13A4-001 ENSG00000164707 9606 - 7:135681237-135728186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENST00000354042
Transcript ID Brain Placenta Testis
ENST00000354042 3.929±2.41 45.335±35.58 4.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082N CIL_00082N_0001 VISTA 7:135472160-136074488
CIL_0002H3 CIL_0002H3_0001 CGP 7:135681237-135748846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006814 IEA sodium ion transport
GO:0008272 TAS sulfate transport
GO:0015382 TAS sodium:sulfate symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035725 TAS sodium ion transmembrane transport
GO:0055085 IEA:TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031868 Slc13a4-001 protein_coding Mus_musculus 0 2036
ENSMUST00000122829 Slc13a4-002 retained_intron Mus_musculus 0 597
ENSMUST00000155366 Slc13a4-003 retained_intron Mus_musculus 0 420

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