C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002H3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164707-ENSG00000189320 CGP 9606 7:135681237-135748846
GeneTranscriptPositionBiotype
ENSG00000164707 (SLC13A4)
solute carrier family 13 (sodium/sulfate symporter), member 4 		ENST00000354042 (SLC13A4-001) 135681237-135728186 protein_coding
ENST00000378428 (SLC13A4-007) 135708141-135729226 protein_coding
ENST00000422620 (SLC13A4-008) 135721393-135729258 protein_coding
ENST00000471405 (SLC13A4-002) 135681241-135728204 retained_intron
ENST00000478310 (SLC13A4-003) 135707437-135728174 retained_intron
ENST00000480376 (SLC13A4-004) 135699364-135705807 retained_intron
ENST00000491630 (SLC13A4-006) 135681237-135685685 processed_transcript
ENSG00000189320 (FAM180A)
family with sequence similarity 180, member A 		ENST00000338588 (FAM180A-201) 135729599-135748846 protein_coding
ENST00000415751 (FAM180A-003) 135733556-135748712 protein_coding
ENST00000435869 (FAM180A-002) 135728348-135748813 processed_transcript
ENST00000444083 (FAM180A-001) 135729607-135748619 nonsense_mediated_decay
ENSG00000243317 (C7orf73)
chromosome 7 open reading frame 73 		ENST00000422968 (C7orf73-002) 135662564-135693418 processed_transcript
ENST00000507606 (C7orf73-001) 135662521-135676412 protein_coding
ENST00000509448 (C7orf73-004) 135662496-135691873 nonsense_mediated_decay
ENST00000515197 (C7orf73-003) 135662514-135673288 retained_intron
CIL_0002H3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029843-ENSMUSG00000047420 CGP 10090 6:35267957-35326141
GeneTranscriptPositionBiotype
ENSMUSG00000029843 (Slc13a4)
solute carrier family 13 (sodium/sulfate symporters), member 4 		ENSMUST00000031868 (Slc13a4-001) 35267957-35308131 protein_coding
ENSMUST00000122829 (Slc13a4-002) 35286503-35308129 retained_intron
ENSMUST00000155366 (Slc13a4-003) 35280320-35288174 retained_intron
ENSMUSG00000047420 (Fam180a)
family with sequence similarity 180, member A 		ENSMUST00000051176 (Fam180a-201) 35312746-35326141 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002H3_0001ENSG00000164707ENST00000354042ENST00000378428ENST00000422620ENST00000471405ENST00000478310ENST00000480376ENST00000491630ENSG00000189320ENST00000338588ENST00000415751ENST00000435869ENST00000444083ENSG00000243317ENST00000422968ENST00000507606ENST00000509448ENST00000515197CIL_0002H3_0002ENSMUSG00000029843ENSMUST00000031868ENSMUST00000122829ENSMUST00000155366ENSMUSG00000047420ENSMUST00000051176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002H3_0001ENSG00000164707ENST00000354042ENST00000471405ENSG00000189320ENST00000338588ENST00000415751ENST00000435869ENST00000444083ENSG00000243317ENST00000422968ENST00000507606CIL_0002H3_0002ENSMUSG00000029843ENSMUST00000031868ENSMUST00000122829ENSMUST00000155366ENSMUSG00000047420ENSMUST00000051176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164707 ENST00000354042 N/A N/A N/A 3.929±2.41 N/A N/A N/A N/A N/A N/A N/A N/A 45.335±35.58 4.063±0.00
ENST00000378428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471405 N/A N/A N/A N/A 0.163±0.00 0.228±0.00 N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A
ENST00000478310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189320 ENST00000338588 N/A N/A N/A N/A 0.790±0.38 0.458±0.00 3.012±2.59 N/A 2.210±0.00 1.764±0.00 N/A 0.550±0.17 0.276±0.00 0.102±0.00
ENST00000415751 N/A 0.362±0.00 0.751±0.00 0.056±0.00 0.447±0.00 N/A N/A 1.262±0.00 2.061±0.00 0.756±0.33 0.959±0.00 0.714±0.00 0.086±0.02 N/A
ENST00000435869 N/A N/A 0.212±0.00 N/A N/A 0.637±0.00 N/A N/A 1.004±0.00 N/A N/A N/A 0.075±0.00 0.066±0.00
ENST00000444083 0.900±0.00 0.131±0.00 N/A 0.057±0.00 0.709±0.00 1.151±0.04 N/A 1.928±0.41 N/A N/A 0.499±0.00 0.168±0.00 0.068±0.00 0.917±0.00
ENSG00000243317 ENST00000422968 N/A N/A N/A N/A 0.492±0.00 1.078±0.00 N/A 0.872±0.00 N/A 0.786±0.00 N/A N/A N/A N/A
ENST00000507606 7.334±0.00 7.408±0.00 3.911±0.00 5.852±1.28 6.522±3.02 4.058±1.63 5.810±4.39 7.142±3.62 3.955±1.54 4.665±1.48 4.388±2.45 7.179±4.34 13.985±0.05 13.741±1.72
ENST00000509448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029843 ENSMUST00000031868 0.451±0.00 0.544±0.30 N/A 1.203±0.44 0.469±0.13 0.045±0.03 0.136±0.03 0.513±0.17 0.041±0.01 2.150±0.34 0.037±0.02 0.212±0.14 38.152±31.88 0.468±0.18
ENSMUST00000122829 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.02 N/A N/A N/A N/A N/A
ENSMUST00000155366 N/A N/A 0.168±0.00 4.585±0.00 N/A N/A N/A N/A 0.066±0.00 N/A 0.071±0.00 N/A 130.027±75.97 6.248±0.00
ENSMUSG00000047420 ENSMUST00000051176 0.598±0.28 0.563±0.31 0.867±0.22 0.261±0.29 0.994±0.29 0.234±0.11 0.095±0.04 0.256±0.09 0.068±0.04 0.711±0.25 0.195±0.07 2.417±1.88 0.446±0.44 0.146±0.11

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