C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 13 (sodium/sulfate symporters), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029843 Slc13a4 10090 - 6:35267957-35308131 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031868 Slc13a4-001 35267957-35308131 protein_coding
  ENSMUST00000122829 Slc13a4-002 35286503-35308129 retained_intron
  ENSMUST00000155366 Slc13a4-003 35280320-35288174 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031868ENSMUST00000122829ENSMUST00000155366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031868 0.451±0.00 0.544±0.30 N/A 1.203±0.44 0.469±0.13 0.045±0.03 0.136±0.03 0.513±0.17 0.041±0.01 2.150±0.34 0.037±0.02 0.212±0.14 38.152±31.88 0.468±0.18
ENSMUST00000122829 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.02 N/A N/A N/A N/A N/A
ENSMUST00000155366 N/A N/A 0.168±0.00 4.585±0.00 N/A N/A N/A N/A 0.066±0.00 N/A 0.071±0.00 N/A 130.027±75.97 6.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082N CIL_00082N_0002 VISTA 6:35053329-35655339
CIL_0002H3 CIL_0002H3_0002 CGP 6:35267957-35326141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0006814 IEA sodium ion transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059053 slc13a4 solute carrier family 13 (sodium/sulfate symporter), member 4 protein_coding Danio_rerio
ENSG00000164707 SLC13A4 solute carrier family 13 (sodium/sulfate symporter), member 4 protein_coding Homo_sapiens

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