C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sad1 and UNC84 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457861 SUN1-033 ENSG00000164828 9606 + 7:851950-896435 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000457861
Transcript ID Testis
ENST00000457861 26.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018K CIL_00018K_0001 CGP 7:726701-896435
CIL_00018J CIL_00018J_0001 CGP 7:816615-896436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005639 IEA integral component of nuclear inner membrane
GO:0034993 IEA SUN-KASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026976 Get4-001 protein_coding Mus_musculus 0 867
ENSMUST00000110878 Get4-002 protein_coding Mus_musculus 0 865
ENSMUST00000138508 Get4-004 protein_coding Mus_musculus 0 592
ENSMUST00000130326 Get4-003 protein_coding Mus_musculus 0 579
ENSMUST00000124420 Get4-006 retained_intron Mus_musculus 0 270
ENSMUST00000138059 Get4-005 retained_intron Mus_musculus 0 255
ENSMUST00000110882 Sun1-005 protein_coding Mus_musculus 0 215
ENSMUST00000078690 Sun1-004 protein_coding Mus_musculus 0 215
ENSMUST00000110884 Sun1-003 protein_coding Mus_musculus 0 215
ENSMUST00000110883 Sun1-002 protein_coding Mus_musculus 0 215
ENSMUST00000058716 Sun1-001 protein_coding Mus_musculus 0 215
ENSMUST00000135926 Sun1-019 protein_coding Mus_musculus 0 209
ENSMUST00000126110 Sun1-017 processed_transcript Mus_musculus 0 193
ENSMUST00000126108 Sun1-020 retained_intron Mus_musculus 1e-25 122

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