C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165322 ARHGAP12 9606 - 10:31805404-31928876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311380 ARHGAP12-001 31805437-31908874 protein_coding
  ENST00000344936 ARHGAP12-009 31806306-31928807 protein_coding
  ENST00000375245 ARHGAP12-201 31805404-31928876 protein_coding
  ENST00000375250 ARHGAP12-008 31805437-31928814 protein_coding
  ENST00000396144 ARHGAP12-202 31805404-31928876 protein_coding
  ENST00000454919 ARHGAP12-005 31820444-31854180 protein_coding
  ENST00000492028 ARHGAP12-002 31805714-31826974 processed_transcript
  ENST00000493008 ARHGAP12-003 31806294-31809685 processed_transcript
  ENST00000497085 ARHGAP12-004 31806291-31808551 processed_transcript
  ENST00000497103 ARHGAP12-006 31812636-31843556 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311380ENST00000344936ENST00000375245ENST00000375250ENST00000396144ENST00000492028ENST00000493008ENST00000497085
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311380 1.867±0.00 1.023±0.00 N/A 2.589±1.28 1.781±0.00 N/A 1.264±0.00 1.186±0.00 1.125±0.00 N/A 0.827±0.08 1.184±0.00 0.679±0.00 1.807±0.00
ENST00000344936 1.878±0.00 0.964±0.00 N/A 2.173±0.00 1.452±0.44 1.529±0.66 1.975±0.77 1.450±0.00 3.889±2.96 3.362±1.79 0.963±0.00 5.132±2.71 0.895±0.23 1.618±0.00
ENST00000375245 N/A N/A N/A 1.454±0.05 N/A 2.530±0.00 0.381±0.00 1.696±0.00 N/A N/A N/A 3.145±0.05 0.699±0.00 0.962±0.00
ENST00000375250 N/A N/A N/A 1.492±0.00 1.122±0.34 3.091±0.00 N/A 2.227±0.00 1.071±0.00 0.716±0.00 N/A 2.889±1.63 1.127±0.44 0.964±0.00
ENST00000396144 N/A N/A 1.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492028 1.111±0.00 N/A N/A N/A 1.178±0.00 1.041±0.00 N/A 2.332±0.00 N/A 1.589±0.00 0.364±0.00 1.313±0.00 N/A 1.281±0.00
ENST00000493008 N/A N/A N/A N/A 3.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497085 N/A N/A N/A N/A N/A N/A N/A N/A 0.835±0.00 N/A N/A 7.228±0.00 N/A 4.202±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R1 CIL_0000R1_0001 CGP 10:31318495-31928876
CIL_0000R0 CIL_0000R0_0001 CGP 10:31805404-32056431

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002011 IMP morphogenesis of an epithelial sheet
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008548 arhgap12a Rho GTPase activating protein 12a protein_coding Danio_rerio
ENSDARG00000026482 arhgap12b Rho GTPase activating protein 12b protein_coding Danio_rerio
ENSMUSG00000041225 Arhgap12 Rho GTPase activating protein 12 protein_coding Mus_musculus

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