C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344936 ARHGAP12-009 ENSG00000165322 9606 - 10:31806306-31928807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344936
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344936 1.878±0.00 0.964±0.00 2.173±0.00 1.452±0.44 1.529±0.66 1.975±0.77 1.450±0.00 3.889±2.96 3.362±1.79 0.963±0.00 5.132±2.71 0.895±0.23 1.618±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R1 CIL_0000R1_0001 CGP 10:31318495-31928876
CIL_0000R0 CIL_0000R0_0001 CGP 10:31805404-32056431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002011 IMP morphogenesis of an epithelial sheet
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182213 Arhgap12-006 protein_coding Mus_musculus 0 3949
ENSMUST00000182559 Arhgap12-001 protein_coding Mus_musculus 0 3886
ENSMUST00000182066 Arhgap12-008 protein_coding Mus_musculus 0 2556
ENSMUST00000077128 Arhgap12-002 protein_coding Mus_musculus 0 2241
ENSMUST00000062584 Arhgap12-007 protein_coding Mus_musculus 0 1930
ENSMUST00000182038 Arhgap12-003 protein_coding Mus_musculus 0 1495
ENSMUST00000182383 Arhgap12-005 protein_coding Mus_musculus 0 1452
ENSMUST00000181989 Arhgap12-011 processed_transcript Mus_musculus 0 536
ENSMUST00000182921 Arhgap12-013 protein_coding Mus_musculus 0 399
ENSMUST00000182614 Arhgap12-010 processed_transcript Mus_musculus 0 342
ENSMUST00000182101 Arhgap12-014 processed_transcript Mus_musculus 0 311
ENSMUST00000182322 Arhgap12-015 processed_transcript Mus_musculus 2.99878e-43 182

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