C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041225 Arhgap12 10090 - 18:6024427-6136098 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062584 Arhgap12-007 6026432-6135892 protein_coding
  ENSMUST00000077128 Arhgap12-002 6024785-6135907 protein_coding
  ENSMUST00000181989 Arhgap12-011 6064359-6135941 processed_transcript
  ENSMUST00000182038 Arhgap12-003 6061951-6135955 protein_coding
  ENSMUST00000182066 Arhgap12-008 6024427-6112363 protein_coding
  ENSMUST00000182101 Arhgap12-014 6039406-6092857 processed_transcript
  ENSMUST00000182178 Arhgap12-012 6065730-6135935 processed_transcript
  ENSMUST00000182213 Arhgap12-006 6025197-6135960 protein_coding
  ENSMUST00000182322 Arhgap12-015 6061847-6069940 processed_transcript
  ENSMUST00000182343 Arhgap12-016 6032960-6034707 retained_intron
  ENSMUST00000182383 Arhgap12-005 6026556-6135888 protein_coding
  ENSMUST00000182559 Arhgap12-001 6025217-6136098 protein_coding
  ENSMUST00000182572 Arhgap12-004 6068654-6071097 retained_intron
  ENSMUST00000182614 Arhgap12-010 6057559-6135970 processed_transcript
  ENSMUST00000182921 Arhgap12-013 6049278-6111980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062584ENSMUST00000077128ENSMUST00000182038ENSMUST00000182066ENSMUST00000182101ENSMUST00000182213ENSMUST00000182383ENSMUST00000182559ENSMUST00000182614
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.771±0.00 3.180±0.76 N/A
ENSMUST00000077128 0.934±0.11 0.479±0.10 N/A 3.882±1.03 0.741±0.22 1.707±0.14 0.606±0.13 1.060±0.23 0.496±0.16 0.829±0.00 0.774±0.21 2.234±2.38 2.101±0.38 N/A
ENSMUST00000182038 N/A N/A N/A N/A N/A 2.329±0.40 1.749±0.00 1.728±0.00 N/A N/A N/A 1.664±0.41 N/A 7.036±3.79
ENSMUST00000182066 0.497±0.00 N/A 3.007±0.00 3.455±1.26 0.592±0.00 1.299±0.10 N/A 0.597±0.00 N/A N/A 0.569±0.03 5.921±0.79 2.091±0.19 N/A
ENSMUST00000182101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.211±0.00 N/A
ENSMUST00000182213 1.725±0.09 1.131±0.00 4.973±1.20 3.248±0.00 2.331±1.01 2.785±0.73 1.608±0.56 1.718±0.54 1.572±0.33 2.494±0.69 1.353±0.60 1.766±0.80 1.910±0.71 N/A
ENSMUST00000182383 N/A N/A N/A 3.786±0.00 N/A N/A N/A N/A 1.079±0.00 N/A N/A N/A N/A 7.092±0.00
ENSMUST00000182559 0.813±0.08 1.318±0.41 2.580±0.00 5.591±0.00 0.836±0.36 0.998±0.00 0.555±0.03 1.243±0.34 0.746±0.25 1.271±0.20 1.532±0.37 1.509±0.97 3.693±1.14 2.905±0.65
ENSMUST00000182614 N/A 2.123±0.40 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R1 CIL_0000R1_0002 CGP 18:5591860-6136098
CIL_0000R0 CIL_0000R0_0002 CGP 18:6024427-6242174

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002011 IEA morphogenesis of an epithelial sheet
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008548 arhgap12a Rho GTPase activating protein 12a protein_coding Danio_rerio
ENSDARG00000026482 arhgap12b Rho GTPase activating protein 12b protein_coding Danio_rerio
ENSG00000165322 ARHGAP12 Rho GTPase activating protein 12 protein_coding Homo_sapiens

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