C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000R0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165322-ENSG00000170759 CGP 9606 10:31805404-32056431
GeneTranscriptPositionBiotype
ENSG00000165322 (ARHGAP12)
Rho GTPase activating protein 12 		ENST00000311380 (ARHGAP12-001) 31805437-31908874 protein_coding
ENST00000344936 (ARHGAP12-009) 31806306-31928807 protein_coding
ENST00000375245 (ARHGAP12-201) 31805404-31928876 protein_coding
ENST00000375250 (ARHGAP12-008) 31805437-31928814 protein_coding
ENST00000396144 (ARHGAP12-202) 31805404-31928876 protein_coding
ENST00000454919 (ARHGAP12-005) 31820444-31854180 protein_coding
ENST00000492028 (ARHGAP12-002) 31805714-31826974 processed_transcript
ENST00000493008 (ARHGAP12-003) 31806294-31809685 processed_transcript
ENST00000497085 (ARHGAP12-004) 31806291-31808551 processed_transcript
ENST00000497103 (ARHGAP12-006) 31812636-31843556 processed_transcript
ENSG00000170759 (KIF5B)
kinesin family member 5B 		ENST00000302418 (KIF5B-001) 32009010-32056431 protein_coding
ENST00000493889 (KIF5B-002) 32017207-32021094 processed_transcript
ENSG00000230240 (RP11-241I20.1)
 ENST00000415903 (RP11-241I20.1-001) 31983885-31984554 processed_pseudogene
ENSG00000231148 (HMGB1P7)
high mobility group box 1 pseudogene 7 		ENST00000450921 (HMGB1P7-001) 31913143-31913754 processed_pseudogene
ENSG00000239731 (RN7SL825P)
RNA, 7SL, cytoplasmic 825, pseudogene 		ENST00000471327 (RN7SL825P-201) 31992087-31992381 misc_RNA
CIL_0000R0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041225-ENSMUSG00000006740 CGP 10090 18:6024427-6242174
GeneTranscriptPositionBiotype
ENSMUSG00000006740 (Kif5b)
kinesin family member 5B 		ENSMUST00000025083 (Kif5b-001) 6201002-6241523 protein_coding
ENSMUST00000163210 (Kif5b-002) 6214569-6241470 protein_coding
ENSMUST00000164426 (Kif5b-003) 6213446-6224029 retained_intron
ENSMUST00000166249 (Kif5b-007) 6220860-6223038 retained_intron
ENSMUST00000168031 (Kif5b-004) 6203089-6214540 retained_intron
ENSMUST00000170959 (Kif5b-005) 6241314-6242174 processed_transcript
ENSMUSG00000041225 (Arhgap12)
Rho GTPase activating protein 12 		ENSMUST00000062584 (Arhgap12-007) 6026432-6135892 protein_coding
ENSMUST00000077128 (Arhgap12-002) 6024785-6135907 protein_coding
ENSMUST00000181989 (Arhgap12-011) 6064359-6135941 processed_transcript
ENSMUST00000182038 (Arhgap12-003) 6061951-6135955 protein_coding
ENSMUST00000182066 (Arhgap12-008) 6024427-6112363 protein_coding
ENSMUST00000182101 (Arhgap12-014) 6039406-6092857 processed_transcript
ENSMUST00000182178 (Arhgap12-012) 6065730-6135935 processed_transcript
ENSMUST00000182213 (Arhgap12-006) 6025197-6135960 protein_coding
ENSMUST00000182322 (Arhgap12-015) 6061847-6069940 processed_transcript
ENSMUST00000182343 (Arhgap12-016) 6032960-6034707 retained_intron
ENSMUST00000182383 (Arhgap12-005) 6026556-6135888 protein_coding
ENSMUST00000182559 (Arhgap12-001) 6025217-6136098 protein_coding
ENSMUST00000182572 (Arhgap12-004) 6068654-6071097 retained_intron
ENSMUST00000182614 (Arhgap12-010) 6057559-6135970 processed_transcript
ENSMUST00000182921 (Arhgap12-013) 6049278-6111980 protein_coding
ENSMUSG00000091165 (Gm17036)
predicted gene 17036 		ENSMUST00000168187 (Gm17036-001) 6213913-6227324 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R0_0001ENSG00000165322ENST00000311380ENST00000344936ENST00000375245ENST00000375250ENST00000396144ENST00000454919ENST00000492028ENST00000493008ENST00000497085ENST00000497103ENSG00000170759ENST00000302418ENST00000493889ENSG00000230240ENST00000415903ENSG00000231148ENST00000450921ENSG00000239731ENST00000471327CIL_0000R0_0002ENSMUSG00000006740ENSMUST00000025083ENSMUST00000163210ENSMUST00000164426ENSMUST00000166249ENSMUST00000168031ENSMUST00000170959ENSMUSG00000041225ENSMUST00000062584ENSMUST00000077128ENSMUST00000181989ENSMUST00000182038ENSMUST00000182066ENSMUST00000182101ENSMUST00000182178ENSMUST00000182213ENSMUST00000182322ENSMUST00000182343ENSMUST00000182383ENSMUST00000182559ENSMUST00000182572ENSMUST00000182614ENSMUST00000182921ENSMUSG00000091165ENSMUST00000168187
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R0_0001ENSG00000165322ENST00000311380ENST00000344936ENST00000375245ENST00000375250ENST00000396144ENST00000492028ENST00000493008ENST00000497085ENSG00000170759ENST00000302418ENST00000493889ENSG00000230240ENST00000415903ENSG00000231148ENST00000450921ENSG00000239731ENST00000471327CIL_0000R0_0002ENSMUSG00000006740ENSMUST00000025083ENSMUST00000163210ENSMUST00000164426ENSMUST00000168031ENSMUSG00000041225ENSMUST00000062584ENSMUST00000077128ENSMUST00000182038ENSMUST00000182066ENSMUST00000182101ENSMUST00000182213ENSMUST00000182383ENSMUST00000182559ENSMUST00000182614ENSMUSG00000091165ENSMUST00000168187
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165322 ENST00000311380 1.867±0.00 1.023±0.00 N/A 2.589±1.28 1.781±0.00 N/A 1.264±0.00 1.186±0.00 1.125±0.00 N/A 0.827±0.08 1.184±0.00 0.679±0.00 1.807±0.00
ENST00000344936 1.878±0.00 0.964±0.00 N/A 2.173±0.00 1.452±0.44 1.529±0.66 1.975±0.77 1.450±0.00 3.889±2.96 3.362±1.79 0.963±0.00 5.132±2.71 0.895±0.23 1.618±0.00
ENST00000375245 N/A N/A N/A 1.454±0.05 N/A 2.530±0.00 0.381±0.00 1.696±0.00 N/A N/A N/A 3.145±0.05 0.699±0.00 0.962±0.00
ENST00000375250 N/A N/A N/A 1.492±0.00 1.122±0.34 3.091±0.00 N/A 2.227±0.00 1.071±0.00 0.716±0.00 N/A 2.889±1.63 1.127±0.44 0.964±0.00
ENST00000396144 N/A N/A 1.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492028 1.111±0.00 N/A N/A N/A 1.178±0.00 1.041±0.00 N/A 2.332±0.00 N/A 1.589±0.00 0.364±0.00 1.313±0.00 N/A 1.281±0.00
ENST00000493008 N/A N/A N/A N/A 3.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497085 N/A N/A N/A N/A N/A N/A N/A N/A 0.835±0.00 N/A N/A 7.228±0.00 N/A 4.202±0.00
ENST00000497103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170759 ENST00000302418 22.550±0.00 22.627±0.00 7.577±0.00 21.629±5.97 34.798±6.16 29.558±8.75 24.258±11.39 12.869±10.90 16.906±11.58 23.096±5.38 14.437±10.67 35.793±23.68 16.713±11.09 42.612±13.32
ENST00000493889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.547±0.00
ENSG00000230240 ENST00000415903 N/A N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A 0.226±0.00 N/A N/A
ENSG00000231148 ENST00000450921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A 0.050±0.00
ENSG00000239731 ENST00000471327 0.367±0.00 0.583±0.00 N/A 0.216±0.00 0.411±0.00 0.061±0.00 N/A 0.401±0.00 N/A N/A N/A N/A N/A 0.129±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006740 ENSMUST00000025083 10.655±2.61 27.978±5.72 21.902±1.50 17.472±4.61 7.640±2.23 14.492±1.80 7.147±0.31 9.051±1.35 6.347±3.42 16.140±0.99 12.735±1.92 14.468±4.88 15.437±3.49 2.633±0.32
ENSMUST00000163210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.155±0.00 N/A N/A
ENSMUST00000164426 N/A N/A N/A 37.236±0.00 N/A N/A N/A N/A N/A N/A N/A 33.008±0.00 21.118±0.00 8.147±0.00
ENSMUST00000166249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168031 3.266±0.29 N/A N/A 14.787±11.47 4.484±0.95 N/A 2.471±0.50 2.976±0.33 1.452±0.18 4.023±0.00 N/A 8.267±6.75 14.284±4.00 2.122±1.08
ENSMUST00000170959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041225 ENSMUST00000062584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.771±0.00 3.180±0.76 N/A
ENSMUST00000077128 0.934±0.11 0.479±0.10 N/A 3.882±1.03 0.741±0.22 1.707±0.14 0.606±0.13 1.060±0.23 0.496±0.16 0.829±0.00 0.774±0.21 2.234±2.38 2.101±0.38 N/A
ENSMUST00000181989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182038 N/A N/A N/A N/A N/A 2.329±0.40 1.749±0.00 1.728±0.00 N/A N/A N/A 1.664±0.41 N/A 7.036±3.79
ENSMUST00000182066 0.497±0.00 N/A 3.007±0.00 3.455±1.26 0.592±0.00 1.299±0.10 N/A 0.597±0.00 N/A N/A 0.569±0.03 5.921±0.79 2.091±0.19 N/A
ENSMUST00000182101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.211±0.00 N/A
ENSMUST00000182178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182213 1.725±0.09 1.131±0.00 4.973±1.20 3.248±0.00 2.331±1.01 2.785±0.73 1.608±0.56 1.718±0.54 1.572±0.33 2.494±0.69 1.353±0.60 1.766±0.80 1.910±0.71 N/A
ENSMUST00000182322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182383 N/A N/A N/A 3.786±0.00 N/A N/A N/A N/A 1.079±0.00 N/A N/A N/A N/A 7.092±0.00
ENSMUST00000182559 0.813±0.08 1.318±0.41 2.580±0.00 5.591±0.00 0.836±0.36 0.998±0.00 0.555±0.03 1.243±0.34 0.746±0.25 1.271±0.20 1.532±0.37 1.509±0.97 3.693±1.14 2.905±0.65
ENSMUST00000182572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182614 N/A 2.123±0.40 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000091165 ENSMUST00000168187 N/A N/A N/A 618.105±0.00 N/A N/A N/A N/A N/A N/A N/A 634.713±0.00 436.330±53.99 N/A

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