C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166676 TVP23A 9606 - 16:10760919-10818794 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299866 TVP23A-001 10766676-10818785 protein_coding
  ENST00000456096 TVP23A-008 10761226-10818600 nonsense_mediated_decay
  ENST00000570692 TVP23A-009 10775014-10818794 processed_transcript
  ENST00000572102 TVP23A-003 10766681-10773441 protein_coding
  ENST00000572428 TVP23A-002 10766676-10774996 protein_coding
  ENST00000572980 TVP23A-007 10760919-10818607 processed_transcript
  ENST00000573360 TVP23A-004 10766676-10818651 nonsense_mediated_decay
  ENST00000573857 TVP23A-005 10761226-10818600 processed_transcript
  ENST00000575135 TVP23A-006 10761226-10818600 nonsense_mediated_decay
  ENST00000612195 TVP23A-201 10761226-10818600 protein_coding
  ENST00000619408 TVP23A-010 10769240-10775031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000572102ENST00000572428ENST00000573360ENST00000612195
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000572102 1.211±0.00 4.459±0.00 N/A 1.631±0.00 1.289±0.00 1.450±1.05 1.567±1.16 1.482±0.00 1.683±0.00 1.096±0.70 1.657±0.11 2.226±0.07 2.470±0.10
ENST00000572428 N/A N/A 1.814±0.00 0.627±0.00 N/A N/A N/A 0.268±0.00 N/A N/A 2.309±0.20 N/A N/A
ENST00000573360 N/A N/A 0.869±0.07 N/A N/A N/A N/A N/A N/A N/A 1.343±0.00 N/A N/A
ENST00000612195 N/A N/A N/A N/A N/A N/A N/A N/A 1.952±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0001 CGP 16:10627501-10769351
CIL_00074Z CIL_00074Z_0001 CGP 16:10743786-10818794
CIL_000750 CIL_000750_0001 CGP 16:10760919-10932281

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000050908 Tvp23a trans-golgi network vesicle protein 23A protein_coding Mus_musculus

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