C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573360 TVP23A-004 ENSG00000166676 9606 - 16:10766676-10818651 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000573360
Transcript ID Brain Ovary
ENST00000573360 0.869±0.07 1.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0001 CGP 16:10627501-10769351
CIL_00074Z CIL_00074Z_0001 CGP 16:10743786-10818794
CIL_000750 CIL_000750_0001 CGP 16:10760919-10932281

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051118 Tvp23a-001 protein_coding Mus_musculus 0 584
ENSMUST00000153027 Tvp23a-002 processed_transcript Mus_musculus 0 575
ENSMUST00000135315 Tvp23a-005 processed_transcript Mus_musculus 0 202
ENSMUST00000141587 Tvp23a-004 processed_transcript Mus_musculus 0 200
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000003 66

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