C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trans-golgi network vesicle protein 23A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050908 Tvp23a 10090 - 16:10420557-10447362 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051118 Tvp23a-001 10420557-10447362 protein_coding
  ENSMUST00000128288 Tvp23a-003 10423244-10447144 nonsense_mediated_decay
  ENSMUST00000135315 Tvp23a-005 10425863-10429185 processed_transcript
  ENSMUST00000141587 Tvp23a-004 10427039-10429261 processed_transcript
  ENSMUST00000153027 Tvp23a-002 10424211-10447327 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000051118
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000051118 3.663±1.84 2.586±1.19 10.898±6.54 1.992±0.00 0.820±0.02 1.501±0.16 2.009±0.76 2.183±0.00 0.405±0.04 1.804±0.02 0.677±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0002 CGP 16:10357948-10424428
CIL_00074Z CIL_00074Z_0002 CGP 16:10411948-10447362
CIL_000750 CIL_000750_0002 CGP 16:10420557-10527564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166676 TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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