C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transglutaminase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166948 TGM6 9606 + 20:2380908-2432753 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000202625 TGM6-001 2380908-2432753 protein_coding
  ENST00000381423 TGM6-002 2380908-2432753 protein_coding
  ENST00000477505 TGM6-003 2394452-2400444 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000202625ENST00000381423ENST00000477505
Transcript ID Ovary Testis
ENST00000202625 0.022±0.00 N/A
ENST00000381423 N/A 0.061±0.00
ENST00000477505 0.102±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FU CIL_0000FU_0001 CGP 20:2296001-2432753
CIL_0000FT CIL_0000FT_0001 CGP 20:2380908-2470853

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003810 IDA:IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005737 IEA cytoplasm
GO:0008219 IEA cell death
GO:0018149 IEA peptide cross-linking
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074155 tgm5l transglutaminase 5, like protein_coding Danio_rerio
ENSDARG00000097651 tgm8 transglutaminase 8 protein_coding Danio_rerio
ENSMUSG00000027403 Tgm6 transglutaminase 6 protein_coding Mus_musculus

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