C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000FU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125780-ENSG00000166948 CGP 9606 20:2296001-2432753
GeneTranscriptPositionBiotype
ENSG00000125780 (TGM3)
transglutaminase 3 		ENST00000381458 (TGM3-001) 2296001-2341078 protein_coding
ENST00000463090 (TGM3-002) 2312978-2326003 processed_transcript
ENSG00000166948 (TGM6)
transglutaminase 6 		ENST00000202625 (TGM6-001) 2380908-2432753 protein_coding
ENST00000381423 (TGM6-002) 2380908-2432753 protein_coding
ENST00000477505 (TGM6-003) 2394452-2400444 processed_transcript
CIL_0000FU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027401-ENSMUSG00000027403 CGP 10090 2:130012349-130154232
GeneTranscriptPositionBiotype
ENSMUSG00000027401 (Tgm3)
transglutaminase 3, E polypeptide 		ENSMUST00000110299 (Tgm3-001) 130012349-130050399 protein_coding
ENSMUSG00000027403 (Tgm6)
transglutaminase 6 		ENSMUST00000028888 (Tgm6-001) 130123275-130154232 protein_coding
ENSMUST00000140947 (Tgm6-003) 130112416-130154232 processed_transcript
ENSMUST00000147616 (Tgm6-002) 130123275-130154232 processed_transcript
ENSMUSG00000074804 (AU015228)
expressed sequence AU015228 		ENSMUST00000121103 (AU015228-001) 130100524-130101843 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FU_0001ENSG00000125780ENST00000381458ENST00000463090ENSG00000166948ENST00000202625ENST00000381423ENST00000477505CIL_0000FU_0002ENSMUSG00000027401ENSMUST00000110299ENSMUSG00000027403ENSMUST00000028888ENSMUST00000140947ENSMUST00000147616ENSMUSG00000074804ENSMUST00000121103
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FU_0001ENSG00000125780ENST00000381458ENST00000463090ENSG00000166948ENST00000202625ENST00000381423ENST00000477505CIL_0000FU_0002ENSMUSG00000027401ENSMUST00000110299ENSMUSG00000027403ENSMUST00000028888ENSMUST00000140947ENSMUST00000147616ENSMUSG00000074804ENSMUST00000121103
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125780 ENST00000381458 0.207±0.00 0.008±0.00 0.021±0.00 0.080±0.00 0.018±0.00 0.129±0.09 0.007±0.00 0.034±0.00 0.095±0.00 0.213±0.00 0.007±0.00 11.176±14.88 0.045±0.00 2.102±0.43
ENST00000463090 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A N/A N/A N/A
ENSG00000166948 ENST00000202625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A
ENST00000381423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00
ENST00000477505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027401 ENSMUST00000110299 0.041±0.02 0.796±0.31 0.587±0.00 0.381±0.28 0.074±0.05 233.470±24.23 0.030±0.01 0.031±0.02 0.037±0.04 19.651±19.54 0.027±0.02 0.118±0.05 0.025±0.01 0.474±0.18
ENSMUSG00000027403 ENSMUST00000028888 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A 0.180±0.00 0.028±0.00
ENSMUST00000140947 0.026±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.037±0.00 0.035±0.00 0.041±0.03 0.067±0.04
ENSMUST00000147616 0.012±0.00 N/A N/A 0.088±0.00 N/A 0.017±0.00 N/A N/A 0.021±0.00 0.028±0.00 N/A 0.037±0.03 0.052±0.04 0.184±0.05
ENSMUSG00000074804 ENSMUST00000121103 0.028±0.00 N/A N/A 0.026±0.00 0.065±0.00 N/A N/A N/A 0.052±0.04 N/A N/A 0.110±0.06 0.018±0.01 0.041±0.02

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