C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transglutaminase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000202625 TGM6-001 ENSG00000166948 9606 + 20:2380908-2432753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000202625
Transcript ID Ovary
ENST00000202625 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FU CIL_0000FU_0001 CGP 20:2296001-2432753
CIL_0000FT CIL_0000FT_0001 CGP 20:2380908-2470853

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IDA:IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005737 IEA cytoplasm
GO:0008219 IEA cell death
GO:0018149 IEA peptide cross-linking
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028888 Tgm6-001 protein_coding Mus_musculus 0 2148
ENSMUST00000140947 Tgm6-003 processed_transcript Mus_musculus 0 2132
ENSMUST00000147616 Tgm6-002 processed_transcript Mus_musculus 0 1666

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