C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thyrotrophic embryonic factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167074 TEF 9606 + 22:41367333-41399326 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266304 TEF-001 41381929-41399326 protein_coding
  ENST00000406644 TEF-003 41367333-41399324 protein_coding
  ENST00000413942 TEF-004 41382935-41394274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266304ENST00000406644
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266304 7.741±0.00 12.458±0.00 2.333±0.00 15.694±6.50 5.220±2.53 4.756±3.56 4.844±3.69 8.045±2.17 3.024±0.17 2.850±2.25 3.771±0.61 5.509±5.57 2.549±0.79 7.549±3.60
ENST00000406644 N/A N/A 0.826±0.00 2.683±0.00 N/A N/A 0.508±0.00 1.658±0.00 1.138±0.13 0.352±0.00 0.753±0.00 4.631±3.11 1.699±0.00 1.564±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065M CIL_00065M_0001 CGP 22:41301522-41399326

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003690 IEA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0042803 IEA protein homodimerization activity
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038401 tefb thyrotroph embryonic factor b protein_coding Danio_rerio
ENSDARG00000039117 tefa thyrotroph embryonic factor a protein_coding Danio_rerio
ENSMUSG00000022389 Tef thyrotroph embryonic factor protein_coding Mus_musculus

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