C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100403-ENSG00000167074 CGP 9606 22:41301522-41399326
GeneTranscriptPositionBiotype
ENSG00000100403 (ZC3H7B)
zinc finger CCCH-type containing 7B 		ENST00000352645 (ZC3H7B-001) 41301522-41360147 protein_coding
ENST00000486331 (ZC3H7B-002) 41301715-41336843 retained_intron
ENSG00000167074 (TEF)
thyrotrophic embryonic factor 		ENST00000266304 (TEF-001) 41381929-41399326 protein_coding
ENST00000406644 (TEF-003) 41367333-41399324 protein_coding
ENST00000413942 (TEF-004) 41382935-41394274 protein_coding
ENSG00000199865 (RNU6-495P)
RNA, U6 small nuclear 495, pseudogene 		ENST00000362995 (RNU6-495P-201) 41377177-41377283 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00065M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022390-ENSMUSG00000022389 CGP 10090 15:81744848-81826861
GeneTranscriptPositionBiotype
ENSMUSG00000022389 (Tef)
thyrotroph embryonic factor 		ENSMUST00000023024 (Tef-006) 81811414-81826698 protein_coding
ENSMUST00000109553 (Tef-001) 81802421-81826861 protein_coding
ENSMUST00000164673 (Tef-005) 81802737-81817012 retained_intron
ENSMUST00000166302 (Tef-004) 81802707-81806049 processed_transcript
ENSMUST00000167138 (Tef-007) 81820593-81821383 processed_transcript
ENSMUST00000168200 (Tef-008) 81811046-81821256 protein_coding
ENSMUST00000168632 (Tef-010) 81820943-81823779 retained_intron
ENSMUST00000169952 (Tef-003) 81802826-81805911 processed_transcript
ENSMUST00000170027 (Tef-002) 81802730-81805354 processed_transcript
ENSMUST00000172208 (Tef-009) 81812159-81815209 protein_coding
ENSMUSG00000022390 (Zc3h7b)
zinc finger CCCH type containing 7B 		ENSMUST00000109554 (Zc3h7b-201) 81744848-81796269 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065M_0001ENSG00000100403ENST00000352645ENST00000486331ENSG00000167074ENST00000266304ENST00000406644ENST00000413942ENSG00000199865ENST00000362995CIL_00065M_0002ENSMUSG00000022389ENSMUST00000023024ENSMUST00000109553ENSMUST00000164673ENSMUST00000166302ENSMUST00000167138ENSMUST00000168200ENSMUST00000168632ENSMUST00000169952ENSMUST00000170027ENSMUST00000172208ENSMUSG00000022390ENSMUST00000109554
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065M_0001ENSG00000100403ENST00000352645ENST00000486331ENSG00000167074ENST00000266304ENST00000406644ENSG00000199865ENST00000362995CIL_00065M_0002ENSMUSG00000022389ENSMUST00000023024ENSMUST00000109553ENSMUST00000164673ENSMUST00000168632ENSMUSG00000022390ENSMUST00000109554
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100403 ENST00000352645 16.289±0.00 19.866±0.00 3.665±0.00 17.141±10.07 12.229±10.21 9.121±7.07 6.642±4.56 11.869±8.27 10.228±7.00 12.421±9.94 5.185±2.68 28.918±19.42 14.685±1.67 11.081±5.26
ENST00000486331 N/A N/A N/A N/A 0.707±0.00 0.269±0.00 N/A 0.411±0.00 0.425±0.00 N/A N/A N/A N/A N/A
ENSG00000167074 ENST00000266304 7.741±0.00 12.458±0.00 2.333±0.00 15.694±6.50 5.220±2.53 4.756±3.56 4.844±3.69 8.045±2.17 3.024±0.17 2.850±2.25 3.771±0.61 5.509±5.57 2.549±0.79 7.549±3.60
ENST00000406644 N/A N/A 0.826±0.00 2.683±0.00 N/A N/A 0.508±0.00 1.658±0.00 1.138±0.13 0.352±0.00 0.753±0.00 4.631±3.11 1.699±0.00 1.564±0.00
ENST00000413942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199865 ENST00000362995 N/A N/A N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022389 ENSMUST00000023024 12.948±4.91 22.279±3.17 26.790±0.16 8.341±5.81 12.165±0.98 5.395±1.01 7.911±1.21 12.679±0.41 4.691±3.09 19.229±8.43 43.471±5.87 20.424±7.05 2.870±1.22 4.334±2.15
ENSMUST00000109553 7.868±0.00 4.399±1.02 34.166±6.22 N/A N/A 1.508±0.00 N/A 18.394±7.43 2.575±2.07 20.390±2.30 21.704±6.51 5.640±0.75 0.724±0.00 0.397±0.00
ENSMUST00000164673 5.219±0.00 N/A N/A 2.541±0.00 N/A N/A N/A N/A 2.621±1.72 14.723±3.73 N/A N/A N/A 0.642±0.00
ENSMUST00000166302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168632 N/A N/A N/A 78.722±0.00 N/A N/A N/A N/A N/A N/A N/A 55.092±0.00 8.058±5.83 9.176±0.00
ENSMUST00000169952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022390 ENSMUST00000109554 15.208±4.66 24.250±0.52 6.952±0.81 32.454±4.33 10.773±5.37 10.450±1.18 8.738±2.67 12.860±4.93 5.044±0.85 17.160±4.08 7.514±0.75 22.620±7.52 5.608±4.14 2.646±1.23

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