C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stromal interaction molecule 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167323 STIM1 9606 + 11:3854527-4093210 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300737 STIM1-001 3855702-4093209 protein_coding
  ENST00000524822 STIM1-017 3888087-4023987 protein_coding
  ENST00000525055 STIM1-007 3903463-4055610 protein_coding
  ENST00000525403 STIM1-004 3854527-4059337 protein_coding
  ENST00000526156 STIM1-011 4086205-4091966 retained_intron
  ENST00000526596 STIM1-010 4074519-4091669 protein_coding
  ENST00000526771 STIM1-019 3989162-4070064 processed_transcript
  ENST00000527484 STIM1-020 3999602-4070069 processed_transcript
  ENST00000527651 STIM1-002 3856182-4091798 protein_coding
  ENST00000528656 STIM1-016 3903463-4059356 protein_coding
  ENST00000530554 STIM1-018 3868048-4055604 protein_coding
  ENST00000531332 STIM1-009 4083157-4091433 retained_intron
  ENST00000532610 STIM1-015 3867103-4059403 protein_coding
  ENST00000532919 STIM1-005 3867307-4070052 protein_coding
  ENST00000532990 STIM1-006 3947343-4055565 protein_coding
  ENST00000533343 STIM1-008 4082205-4083654 retained_intron
  ENST00000533445 STIM1-014 4055523-4082221 processed_transcript
  ENST00000533977 STIM1-003 4058749-4092126 protein_coding
  ENST00000534707 STIM1-013 4088573-4089085 processed_transcript
  ENST00000616714 STIM1-201 3855703-4093210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300737ENST00000526156ENST00000526596ENST00000526771ENST00000527651ENST00000616714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300737 7.928±0.00 13.025±0.00 N/A 13.532±0.00 10.952±8.55 7.118±1.42 2.600±1.99 5.215±1.87 6.087±3.02 12.947±0.00 20.396±17.74 12.110±6.21 12.156±2.47 11.541±0.81
ENST00000526156 N/A N/A 1.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526596 9.716±0.00 12.014±0.00 0.912±0.00 13.472±0.00 21.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.783±0.00 25.996±0.00
ENST00000527651 N/A N/A N/A N/A 1.552±0.00 N/A 0.319±0.00 4.444±0.00 N/A 1.728±0.00 3.057±0.00 2.686±0.00 N/A N/A
ENST00000616714 N/A N/A N/A 2.178±0.00 N/A N/A N/A N/A 1.303±0.00 1.106±0.00 9.557±4.64 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G2 CIL_0000G2_0002 CGP 11:3826978-4093210
CIL_0005LF CIL_0005LF_0001 CGP 11:3854527-4138876

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002115 IEA store-operated calcium entry
GO:0005246 IEA calcium channel regulator activity
GO:0005509 IDA calcium ion binding
GO:0005513 IDA detection of calcium ion
GO:0005515 IPI:IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005874 IEA microtubule
GO:0005886 IEA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0007596 TAS blood coagulation
GO:0015279 IEA store-operated calcium channel activity
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0030426 IEA growth cone
GO:0032237 IDA activation of store-operated calcium channel activity
GO:0032541 IDA cortical endoplasmic reticulum
GO:0042802 IPI identical protein binding
GO:0043234 IEA protein complex
GO:0051010 IDA microtubule plus-end binding
GO:0051924 IDA regulation of calcium ion transport
GO:0070588 IEA calcium ion transmembrane transport
GO:2001256 IEA regulation of store-operated calcium entry

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060723 stim1a stromal interaction molecule 1a protein_coding Danio_rerio
ENSDARG00000061560 stim1b stromal interaction molecule 1b protein_coding Danio_rerio
ENSMUSG00000030987 Stim1 stromal interaction molecule 1 protein_coding Mus_musculus

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