C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal interaction molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300737 STIM1-001 ENSG00000167323 9606 + 11:3855702-4093209 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300737
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300737 7.928±0.00 13.025±0.00 13.532±0.00 10.952±8.55 7.118±1.42 2.600±1.99 5.215±1.87 6.087±3.02 12.947±0.00 20.396±17.74 12.110±6.21 12.156±2.47 11.541±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G2 CIL_0000G2_0002 CGP 11:3826978-4093210
CIL_0005LF CIL_0005LF_0001 CGP 11:3854527-4138876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005513 IDA detection of calcium ion
GO:0005515 IPI:IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005874 IEA microtubule
GO:0005887 IDA integral component of plasma membrane
GO:0007596 TAS blood coagulation
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0032237 IDA activation of store-operated calcium channel activity
GO:0032541 IDA cortical endoplasmic reticulum
GO:0042802 IPI identical protein binding
GO:0051010 IDA microtubule plus-end binding
GO:0051924 IDA regulation of calcium ion transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033289 Stim1-201 protein_coding Mus_musculus 0 3993

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