C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 80
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167767 KRT80 9606 - 12:52168996-52192000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313234 KRT80-001 52168996-52192000 protein_coding
  ENST00000394815 KRT80-002 52168996-52192000 protein_coding
  ENST00000466011 KRT80-003 52169523-52185749 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000313234ENST00000394815ENST00000466011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000313234 N/A N/A 0.138±0.00 N/A N/A 0.081±0.00 N/A 1.063±0.00 N/A N/A 1.530±1.85 5.272±2.74 0.182±0.00
ENST00000394815 0.145±0.00 0.042±0.00 N/A 0.024±0.00 1.369±0.00 N/A N/A N/A 0.051±0.00 0.262±0.00 0.651±0.04 6.398±2.05 0.515±0.00
ENST00000466011 N/A N/A N/A 0.043±0.00 0.176±0.00 0.013±0.00 0.053±0.02 0.127±0.00 N/A N/A 0.974±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JR CIL_0006JR_0001 CGP 12:52069246-52192000
CIL_0006TB CIL_0006TB_0001 CGP 12:52168996-52252186

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005737 IDA cytoplasm
GO:0005882 IDA:IEA intermediate filament
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034836 KRT80 keratin 80 protein_coding Danio_rerio
ENSMUSG00000037185 Krt80 keratin 80 protein_coding Mus_musculus

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