C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 80
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466011 KRT80-003 ENSG00000167767 9606 - 12:52169523-52185749 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyOvaryENST00000466011
Transcript ID Brain Breast Colon Heart Kidney Ovary
ENST00000466011 0.043±0.00 0.176±0.00 0.013±0.00 0.053±0.02 0.127±0.00 0.974±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JR CIL_0006JR_0001 CGP 12:52069246-52192000
CIL_0006TB CIL_0006TB_0001 CGP 12:52168996-52252186

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077196 Krt80-201 protein_coding Mus_musculus 0 789
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 226
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 0 204
ENSDART00000137533 krt8-003 retained_intron Danio_rerio 2e-20 106
ENSDART00000081215 krt8-001 protein_coding Danio_rerio 6e-20 104
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 8e-19 100
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 8e-19 100

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