C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine zipper-EF-hand containing transmembrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168924 LETM1 9606 - 4:1811479-1856247 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302787 LETM1-001 1811479-1856247 protein_coding
  ENST00000466175 LETM1-002 1834100-1855955 retained_intron
  ENST00000505551 LETM1-003 1833074-1843211 retained_intron
  ENST00000510940 LETM1-007 1819372-1822642 retained_intron
  ENST00000511977 LETM1-006 1822774-1832879 retained_intron
  ENST00000512189 LETM1-005 1846474-1855971 processed_transcript
  ENST00000512669 LETM1-004 1834206-1839342 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302787 5.493±0.00 5.305±0.00 0.733±0.00 5.998±3.20 4.704±3.27 5.383±2.44 5.398±1.97 5.083±4.66 6.653±0.00 4.007±2.09 8.361±0.00 6.641±4.05 4.324±2.72 11.078±5.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0001 VISTA 4:1311752-1912379
CIL_0006V3 CIL_0006V3_0001 CGP 4:1793307-1856247
CIL_0006V8 CIL_0006V8_0001 CGP 4:1811479-1982207

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005739 ISS mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0016021 IEA integral component of membrane
GO:0042407 IMP cristae formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056978 letm1 leucine zipper-EF-hand containing transmembrane protein 1 protein_coding Danio_rerio
ENSMUSG00000005299 Letm1 leucine zipper-EF-hand containing transmembrane protein 1 protein_coding Mus_musculus

Loading