C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine zipper-EF-hand containing transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302787 LETM1-001 ENSG00000168924 9606 - 4:1811479-1856247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302787 5.493±0.00 5.305±0.00 0.733±0.00 5.998±3.20 4.704±3.27 5.383±2.44 5.398±1.97 5.083±4.66 6.653±0.00 4.007±2.09 8.361±0.00 6.641±4.05 4.324±2.72 11.078±5.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0001 VISTA 4:1311752-1912379
CIL_0006V3 CIL_0006V3_0001 CGP 4:1793307-1856247
CIL_0006V8 CIL_0006V8_0001 CGP 4:1811479-1982207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005739 ISS mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0016021 IEA integral component of membrane
GO:0042407 IMP cristae formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005431 Letm1-001 protein_coding Mus_musculus 0 2233
ENSMUST00000149886 Letm1-003 retained_intron Mus_musculus 0 577

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