C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine zipper-EF-hand containing transmembrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005299 Letm1 10090 - 5:33739673-33782817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005431 Letm1-001 33739673-33782817 protein_coding
  ENSMUST00000144071 Letm1-004 33769562-33770454 processed_transcript
  ENSMUST00000148451 Letm1-002 33776455-33782737 retained_intron
  ENSMUST00000149886 Letm1-003 33742534-33753562 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005431ENSMUST00000149886
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005431 14.395±1.44 23.872±3.25 3.205±0.01 18.052±10.88 13.099±2.55 25.167±1.51 12.917±0.87 21.522±1.13 7.398±5.56 8.961±2.69 3.747±0.28 12.098±3.89 11.972±7.82 3.275±1.20
ENSMUST00000149886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.307±0.00 2.664±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006V3 CIL_0006V3_0002 CGP 5:33721724-33782817
CIL_0006V8 CIL_0006V8_0002 CGP 5:33739673-33897975

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0016021 IEA integral component of membrane
GO:0042407 IEA cristae formation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056978 letm1 leucine zipper-EF-hand containing transmembrane protein 1 protein_coding Danio_rerio
ENSG00000168924 LETM1 leucine zipper-EF-hand containing transmembrane protein 1 protein_coding Homo_sapiens

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