C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, beta 1, 32kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374029 GJB1-003 ENSG00000169562 9606 + X:71215194-71225200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000374029
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000374029 0.011±0.00 2.871±0.00 0.671±0.14 3.479±1.81 22.544±3.65 94.745±0.00 0.435±0.00 0.070±0.03 4.356±3.52 0.064±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057N CIL_00057N_0001 CGP X:71144831-71225516
CIL_00057Q CIL_00057Q_0001 CGP X:71215194-71255146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005922 IEA connexon complex
GO:0006810 TAS transport
GO:0007154 IEA cell communication
GO:0007267 TAS cell-cell signaling
GO:0007399 TAS nervous system development
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016264 TAS gap junction assembly
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119190 Gjb1-002 protein_coding Mus_musculus 0 1441
ENSMUST00000052130 Gjb1-001 protein_coding Mus_musculus 0 1441
ENSMUST00000119080 Gjb1-003 protein_coding Mus_musculus 0 1439

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