C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, beta 1, 32kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374022 GJB1-001 ENSG00000169562 9606 + X:71215212-71225516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungOvaryENST00000374022
Transcript ID Bladder Brain Breast Colon Kidney Lung Ovary
ENST00000374022 0.724±0.00 0.972±0.00 0.127±0.01 0.713±0.00 11.700±0.00 0.096±0.00 2.208±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057N CIL_00057N_0001 CGP X:71144831-71225516
CIL_00057Q CIL_00057Q_0001 CGP X:71215194-71255146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0005921 IEA gap junction
GO:0005922 IEA connexon complex
GO:0006810 TAS transport
GO:0007154 IEA cell communication
GO:0007267 TAS cell-cell signaling
GO:0007399 TAS nervous system development
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016264 TAS gap junction assembly
GO:0042803 IEA protein homodimerization activity
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052130 Gjb1-001 protein_coding Mus_musculus 0 1526
ENSMUST00000119190 Gjb1-002 protein_coding Mus_musculus 0 1447
ENSMUST00000119080 Gjb1-003 protein_coding Mus_musculus 0 1441

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