C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 15 open reading frame 40
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169609 C15orf40 9606 - 15:82988441-83011641 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304177 C15orf40-001 82994823-83011615 protein_coding
  ENST00000451195 C15orf40-012 82990619-83011607 protein_coding
  ENST00000505341 C15orf40-003 83005298-83011594 retained_intron
  ENST00000506912 C15orf40-002 83007851-83011610 retained_intron
  ENST00000508990 C15orf40-004 83004686-83011585 protein_coding
  ENST00000510873 C15orf40-005 82989106-83011604 protein_coding
  ENST00000512638 C15orf40-007 82990561-83011549 nonsense_mediated_decay
  ENST00000514272 C15orf40-014 82988441-83008616 protein_coding
  ENST00000538348 C15orf40-006 82988963-83011607 protein_coding
  ENST00000563387 C15orf40-013 83004867-83011543 nonsense_mediated_decay
  ENST00000565712 C15orf40-008 83005279-83011641 protein_coding
  ENST00000565725 C15orf40-009 83008405-83011639 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304177ENST00000505341ENST00000538348ENST00000565712ENST00000565725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304177 0.476±0.00 1.568±0.00 N/A 0.444±0.07 0.829±0.00 0.580±0.00 0.191±0.13 0.449±0.00 0.376±0.03 0.600±0.00 N/A 0.802±0.15 0.559±0.00 1.127±0.01
ENST00000505341 N/A N/A 0.633±0.00 0.680±0.00 0.702±0.00 N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000538348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.477±0.00 18.649±0.00 12.408±0.00
ENST00000565712 7.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A
ENST00000565725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.501±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026F CIL_00026F_0001 CGP 15:82836946-82991057
CIL_00026I CIL_00026I_0001 CGP 15:82986207-83011641
CIL_0001L5 CIL_0001L5_0001 CGP 15:82988441-83067354

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000097310 C25H15orf40 chromosome 15 open reading frame 40 protein_coding Danio_rerio
ENSMUSG00000025102 3110040N11Rik RIKEN cDNA 3110040N11 gene protein_coding Mus_musculus

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