C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 15 open reading frame 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304177 C15orf40-001 ENSG00000169609 9606 - 15:82994823-83011615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000304177
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000304177 0.476±0.00 1.568±0.00 0.444±0.07 0.829±0.00 0.580±0.00 0.191±0.13 0.449±0.00 0.376±0.03 0.600±0.00 0.802±0.15 0.559±0.00 1.127±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026F CIL_00026F_0001 CGP 15:82836946-82991057
CIL_00026I CIL_00026I_0001 CGP 15:82986207-83011641
CIL_0001L5 CIL_0001L5_0001 CGP 15:82988441-83067354

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000007 69
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.00002 58
ENSMUST00000022734 Dnajc3-201 protein_coding Mus_musculus 0.00002 58

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