C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169612-ENSG00000169609 CGP 9606 15:82986207-83011641
GeneTranscriptPositionBiotype
ENSG00000169609 (C15orf40)
chromosome 15 open reading frame 40 		ENST00000304177 (C15orf40-001) 82994823-83011615 protein_coding
ENST00000451195 (C15orf40-012) 82990619-83011607 protein_coding
ENST00000505341 (C15orf40-003) 83005298-83011594 retained_intron
ENST00000506912 (C15orf40-002) 83007851-83011610 retained_intron
ENST00000508990 (C15orf40-004) 83004686-83011585 protein_coding
ENST00000510873 (C15orf40-005) 82989106-83011604 protein_coding
ENST00000512638 (C15orf40-007) 82990561-83011549 nonsense_mediated_decay
ENST00000514272 (C15orf40-014) 82988441-83008616 protein_coding
ENST00000538348 (C15orf40-006) 82988963-83011607 protein_coding
ENST00000563387 (C15orf40-013) 83004867-83011543 nonsense_mediated_decay
ENST00000565712 (C15orf40-008) 83005279-83011641 protein_coding
ENST00000565725 (C15orf40-009) 83008405-83011639 retained_intron
ENSG00000169612 (FAM103A1)
family with sequence similarity 103, member A1 		ENST00000304191 (FAM103A1-001) 82986207-82991057 protein_coding
CIL_00026I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038646-ENSMUSG00000025102 CGP 10090 7:81762925-81789478
GeneTranscriptPositionBiotype
ENSMUSG00000025102 (3110040N11Rik)
RIKEN cDNA 3110040N11 gene 		ENSMUST00000026092 (3110040N11Rik-001) 81782182-81789478 protein_coding
ENSMUST00000141075 (3110040N11Rik-005) 81783031-81788664 processed_transcript
ENSMUST00000142557 (3110040N11Rik-002) 81783031-81789469 processed_transcript
ENSMUST00000152620 (3110040N11Rik-003) 81783104-81789465 nonsense_mediated_decay
ENSMUST00000154937 (3110040N11Rik-004) 81783050-81789109 processed_transcript
ENSMUSG00000038646 (Fam103a1)
family with sequence similarity 103, member A1 		ENSMUST00000042166 (Fam103a1-001) 81762925-81769491 protein_coding
ENSMUST00000118190 (Fam103a1-002) 81763283-81769480 protein_coding
ENSMUST00000133034 (Fam103a1-003) 81763050-81767659 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026I_0001ENSG00000169609ENST00000304177ENST00000451195ENST00000505341ENST00000506912ENST00000508990ENST00000510873ENST00000512638ENST00000514272ENST00000538348ENST00000563387ENST00000565712ENST00000565725ENSG00000169612ENST00000304191CIL_00026I_0002ENSMUSG00000025102ENSMUST00000026092ENSMUST00000141075ENSMUST00000142557ENSMUST00000152620ENSMUST00000154937ENSMUSG00000038646ENSMUST00000042166ENSMUST00000118190ENSMUST00000133034
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026I_0001ENSG00000169609ENST00000304177ENST00000505341ENST00000538348ENST00000565712ENST00000565725ENSG00000169612ENST00000304191CIL_00026I_0002ENSMUSG00000025102ENSMUST00000026092ENSMUST00000142557ENSMUST00000152620ENSMUSG00000038646ENSMUST00000042166ENSMUST00000118190
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169609 ENST00000304177 0.476±0.00 1.568±0.00 N/A 0.444±0.07 0.829±0.00 0.580±0.00 0.191±0.13 0.449±0.00 0.376±0.03 0.600±0.00 N/A 0.802±0.15 0.559±0.00 1.127±0.01
ENST00000451195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505341 N/A N/A 0.633±0.00 0.680±0.00 0.702±0.00 N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000506912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.477±0.00 18.649±0.00 12.408±0.00
ENST00000563387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565712 7.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A
ENST00000565725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.501±0.00 N/A N/A N/A
ENSG00000169612 ENST00000304191 1.250±0.00 7.336±0.00 1.028±0.00 4.638±1.81 2.651±0.70 2.793±0.58 2.482±1.20 3.721±2.22 2.164±0.30 3.967±1.28 2.586±2.36 7.626±3.33 10.564±5.28 8.504±1.57
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025102 ENSMUST00000026092 4.320±1.59 1.677±0.49 6.753±1.39 3.995±1.63 2.412±0.52 2.765±0.69 1.833±0.13 3.515±0.79 4.296±2.51 1.317±0.07 2.725±0.74 3.962±1.58 4.901±1.78 2.447±0.96
ENSMUST00000141075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142557 6.189±1.40 2.164±0.00 5.593±0.92 9.826±5.14 4.677±1.56 5.424±1.23 4.295±0.89 6.072±2.05 5.412±2.13 2.551±0.54 6.027±0.00 10.643±7.47 10.957±6.82 5.794±6.49
ENSMUST00000152620 8.912±2.13 7.283±0.74 9.594±2.06 4.700±0.37 4.920±1.32 6.569±2.45 4.689±1.60 7.988±1.72 6.185±0.65 3.792±0.84 3.830±1.08 6.737±2.80 6.934±1.55 2.320±0.36
ENSMUST00000154937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038646 ENSMUST00000042166 7.120±2.54 4.325±1.34 26.469±11.19 22.175±10.64 5.194±1.56 8.692±1.98 6.761±0.79 15.667±1.88 17.481±6.91 13.353±0.71 12.360±1.07 6.899±1.31 14.459±8.63 15.450±3.65
ENSMUST00000118190 6.712±0.00 5.327±2.86 N/A N/A 4.306±3.63 5.339±0.00 N/A N/A 1.978±0.00 N/A N/A 10.820±4.47 5.525±4.99 N/A
ENSMUST00000133034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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