C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 26 (anion exchanger), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170615 SLC26A5 9606 - 7:103352730-103446177 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306312 SLC26A5-001 103374207-103446177 protein_coding
  ENST00000339444 SLC26A5-002 103352730-103446151 protein_coding
  ENST00000354356 SLC26A5-201 103374216-103446177 protein_coding
  ENST00000356767 SLC26A5-003 103352730-103446151 protein_coding
  ENST00000393723 SLC26A5-010 103374378-103421522 protein_coding
  ENST00000393727 SLC26A5-009 103374378-103421522 protein_coding
  ENST00000393729 SLC26A5-013 103374266-103443194 protein_coding
  ENST00000393730 SLC26A5-008 103374207-103443196 protein_coding
  ENST00000393735 SLC26A5-004 103352730-103446151 protein_coding
  ENST00000423416 SLC26A5-011 103374261-103443196 nonsense_mediated_decay
  ENST00000432958 SLC26A5-202 103374212-103446177 protein_coding
  ENST00000445809 SLC26A5-005 103374207-103443196 nonsense_mediated_decay
  ENST00000454864 SLC26A5-007 103374207-103443196 nonsense_mediated_decay
  ENST00000456463 SLC26A5-012 103374266-103443194 nonsense_mediated_decay
  ENST00000487407 SLC26A5-006 103388523-103446177 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungOvaryTestisENST00000356767ENST00000393723ENST00000393730ENST00000393735ENST00000423416ENST00000445809ENST00000454864ENST00000456463
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Ovary Testis
ENST00000356767 0.020±0.00 N/A 0.031±0.01 N/A N/A N/A N/A 0.080±0.00 N/A
ENST00000393723 N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A
ENST00000393730 N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENST00000393735 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A
ENST00000423416 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A 0.178±0.00
ENST00000445809 N/A N/A N/A 0.017±0.00 N/A 0.184±0.00 N/A N/A N/A
ENST00000454864 N/A N/A N/A N/A 0.415±0.00 N/A 0.116±0.00 N/A N/A
ENST00000456463 N/A 0.092±0.00 N/A N/A N/A N/A 0.056±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C8 CIL_0005C8_0001 CGP 7:103312474-103369395
CIL_0001RC CIL_0001RC_0002 CGP 7:103344254-103446177
CIL_0005C9 CIL_0005C9_0001 CGP 7:103352730-103989516

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007605 IMP sensory perception of sound
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0008272 IEA sulfate transport
GO:0008360 IEA regulation of cell shape
GO:0015116 IEA sulfate transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0016328 IEA lateral plasma membrane
GO:0030507 IEA spectrin binding
GO:0042391 IEA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:1902358 IEA sulfate transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022424 slc26a5 solute carrier family 26, member 5 protein_coding Danio_rerio
ENSMUSG00000029015 Slc26a5 solute carrier family 26, member 5 protein_coding Mus_musculus

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