C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005C8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105821-ENSG00000161057 CGP 9606 7:103312474-103369395
GeneTranscriptPositionBiotype
ENSG00000105819 (PMPCB)
peptidase (mitochondrial processing) beta 		ENST00000249269 (PMPCB-001) 103297422-103313235 protein_coding
ENST00000428154 (PMPCB-007) 103297435-103312415 protein_coding
ENST00000443722 (PMPCB-006) 103297454-103312365 nonsense_mediated_decay
ENST00000444457 (PMPCB-002) 103297456-103329511 nonsense_mediated_decay
ENST00000453466 (PMPCB-004) 103297457-103312312 nonsense_mediated_decay
ENST00000456433 (PMPCB-009) 103297453-103310475 nonsense_mediated_decay
ENST00000469560 (PMPCB-008) 103310578-103312351 retained_intron
ENST00000498530 (PMPCB-005) 103297456-103309259 retained_intron
ENSG00000161057 (PSMC2)
proteasome (prosome, macropain) 26S subunit, ATPase, 2 		ENST00000292644 (PSMC2-201) 103347712-103369389 protein_coding
ENST00000425206 (PSMC2-002) 103344266-103362057 protein_coding
ENST00000435765 (PSMC2-001) 103344914-103369395 protein_coding
ENST00000457587 (PSMC2-003) 103344254-103362057 protein_coding
ENST00000460021 (PSMC2-004) 103353919-103362467 retained_intron
ENSG00000235354 (CTA-276O3.4)
 ENST00000452798 (CTA-276O3.4-001) 103348601-103348771 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005C8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029014-ENSMUSG00000028932 CGP 10090 5:21757267-21803787
GeneTranscriptPositionBiotype
ENSMUSG00000028932 (Psmc2)
proteasome (prosome, macropain) 26S subunit, ATPase 2 		ENSMUST00000030769 (Psmc2-001) 21785283-21803787 protein_coding
ENSMUST00000132720 (Psmc2-002) 21794103-21798185 retained_intron
ENSMUSG00000029014 (Dnajc2)
DnaJ (Hsp40) homolog, subfamily C, member 2 		ENSMUST00000030771 (Dnajc2-001) 21757267-21785251 protein_coding
ENSMUST00000115192 (Dnajc2-002) 21774507-21785185 protein_coding
ENSMUST00000115193 (Dnajc2-003) 21757272-21785184 protein_coding
ENSMUST00000115195 (Dnajc2-006) 21757282-21785216 protein_coding
ENSMUST00000132962 (Dnajc2-004) 21757281-21785170 retained_intron
ENSMUST00000145955 (Dnajc2-007) 21766418-21768667 retained_intron
ENSMUST00000147987 (Dnajc2-005) 21773522-21785154 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005C8_0001ENSG00000105819ENST00000249269ENST00000428154ENST00000443722ENST00000444457ENST00000453466ENST00000456433ENST00000469560ENST00000498530ENSG00000161057ENST00000292644ENST00000425206ENST00000435765ENST00000457587ENST00000460021ENSG00000235354ENST00000452798CIL_0005C8_0002ENSMUSG00000028932ENSMUST00000030769ENSMUST00000132720ENSMUSG00000029014ENSMUST00000030771ENSMUST00000115192ENSMUST00000115193ENSMUST00000115195ENSMUST00000132962ENSMUST00000145955ENSMUST00000147987
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005C8_0001ENSG00000105819ENST00000249269ENST00000428154ENST00000453466ENST00000456433ENST00000498530ENSG00000161057ENST00000292644ENST00000425206ENSG00000235354ENST00000452798CIL_0005C8_0002ENSMUSG00000028932ENSMUST00000030769ENSMUSG00000029014ENSMUST00000030771ENSMUST00000115193ENSMUST00000115195ENSMUST00000132962
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105819 ENST00000249269 N/A N/A N/A 5.622±0.00 2.391±0.00 3.224±0.00 2.199±0.00 4.163±0.00 N/A N/A 1.124±0.00 3.830±0.00 N/A N/A
ENST00000428154 6.192±0.00 10.690±0.00 3.254±0.00 6.861±3.11 6.535±2.38 8.070±0.00 5.705±1.42 11.080±5.80 8.008±0.54 4.605±0.52 3.101±0.01 19.376±15.13 10.336±6.70 22.815±6.91
ENST00000443722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453466 15.470±0.00 21.444±0.00 N/A 19.816±0.00 19.248±0.00 16.496±0.00 15.907±0.00 21.023±0.00 15.073±0.00 9.092±0.00 4.029±1.74 18.984±0.56 11.244±2.33 29.570±3.21
ENST00000456433 N/A N/A 3.659±0.00 N/A N/A N/A N/A 6.858±0.00 N/A 5.481±0.00 N/A 10.099±0.00 N/A N/A
ENST00000469560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498530 N/A N/A N/A 6.667±0.00 N/A 7.491±0.00 2.901±0.00 4.407±0.00 N/A 3.189±0.00 N/A N/A 30.662±0.00 40.003±0.00
ENSG00000161057 ENST00000292644 14.799±0.00 10.281±0.00 8.803±0.00 12.027±5.22 11.066±5.25 9.861±3.80 8.035±4.67 14.310±6.03 8.090±4.59 7.102±0.40 13.638±6.41 12.612±4.00 4.891±1.74 6.807±3.47
ENST00000425206 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.072±0.00 N/A N/A N/A N/A
ENST00000435765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235354 ENST00000452798 0.183±0.00 N/A N/A 0.222±0.00 0.198±0.00 N/A 0.540±0.00 0.204±0.00 0.355±0.00 1.104±0.00 0.170±0.00 0.599±0.00 N/A 0.535±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028932 ENSMUST00000030769 21.417±1.72 5.863±2.54 43.107±5.25 33.372±12.16 12.590±4.10 11.774±1.79 21.714±0.96 21.168±5.37 32.887±15.81 14.752±4.41 53.361±1.04 22.775±20.10 57.013±16.30 109.546±3.96
ENSMUST00000132720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029014 ENSMUST00000030771 3.630±3.09 N/A 5.869±0.02 13.537±3.23 1.886±1.02 N/A 2.078±0.88 4.185±2.02 9.119±5.51 4.261±4.55 7.851±0.52 17.303±12.19 31.705±32.12 52.710±21.45
ENSMUST00000115192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115193 N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115195 N/A N/A N/A N/A N/A N/A N/A N/A 1.351±0.23 N/A 1.168±0.00 7.348±0.90 3.797±0.00 87.537±0.00
ENSMUST00000132962 0.284±0.00 N/A 0.884±0.09 2.113±0.51 N/A N/A 0.166±0.00 N/A N/A N/A N/A 2.113±1.10 N/A N/A
ENSMUST00000145955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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