C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box N2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170802 FOXN2 9606 + 2:48314637-48379294 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340553 FOXN2-001 48314710-48379294 protein_coding
  ENST00000413569 FOXN2-002 48314637-48373328 protein_coding
  ENST00000616844 FOXN2-201 48346217-48375565 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340553ENST00000413569ENST00000616844
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340553 1.129±0.00 0.815±0.00 1.289±0.12 2.868±1.57 1.770±0.00 0.509±0.00 3.693±0.00 1.102±0.65 5.074±0.00 0.795±0.52 2.508±2.87 0.470±0.29 0.571±0.00
ENST00000413569 N/A N/A N/A N/A 3.980±0.00 2.933±0.00 N/A N/A N/A 2.572±0.00 9.455±0.00 N/A N/A
ENST00000616844 N/A N/A N/A 2.711±0.00 N/A 0.781±0.00 N/A N/A N/A N/A N/A N/A 0.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063U CIL_00063U_0001 CGP 2:47789316-48379294
CIL_000008 CIL_000008_0001 CGP 2:48314637-48515391

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035914 IEA skeletal muscle cell differentiation
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045105 foxn2b forkhead box N2b protein_coding Danio_rerio
ENSDARG00000055574 CABZ01056728.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000034998 Foxn2 forkhead box N2 protein_coding Mus_musculus

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